Pairwise Alignments

Query, 899 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 925 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  253 bits (646), Expect = 4e-71
 Identities = 193/624 (30%), Positives = 298/624 (47%), Gaps = 62/624 (9%)

Query: 294 IVGGRVVDPNLTFCRM---LGYALAEWGPDGMALSRIVAPESMPSLAAAQANGGRASLVA 350
           ++G R+V   L    +   LGY   +W         +  P +  +  A Q   G     +
Sbjct: 336 VLGNRLVTIALALMVVAGALGYLAVDW---------LTRPLNRLAETAEQVQAGNLDAQS 386

Query: 351 SLRRKDGAALPVLLRIAAAPDGTGAVALPLDAVEGALGAASPRTTDTQAPRGDGTEVLGD 410
            +RR D   L     +A A D    V    D +         RT + +       E    
Sbjct: 387 GIRRDDEIGL-----LAEALDAM--VRRVKDDISTLDTRVQERTNELEE-----AETRRR 434

Query: 411 LFFRRAPLAMALVDRSGGVRAANAAFERLFGRDAA---GRPLTALVSDPSGTEALLAAAA 467
           L     P A+A + R   +R  N  +  L  +DAA   GR L + +    G  A  A  A
Sbjct: 435 LILDAIPAAIAYLGRDEIIRFVNRGWAELVRQDAAELIGRDLRSAI----GRFAHAAIQA 490

Query: 468 GASEPPAPCDVTLA-------GGSARSVRFYAAPLDPSGDIA---LCAIDMTEQRALEVQ 517
                 A  +VT         G +  +       L  +G +    + A+D++ ++A E Q
Sbjct: 491 HMERTWAGEEVTFTYSFPHPDGHTVTTRNTLIPQLAANGAVTAMFVLALDISAEKATETQ 550

Query: 518 FAQSQKLQAVGHLAGGVAHDFNNVLTAIIGYCDLLLAKHRPSDPSFPDIMQIKQNANRAA 577
             ++Q+++AVG L+GG+AHDFNN+L+ I+G       ++   D     +    + + R A
Sbjct: 551 LMEAQRMKAVGQLSGGLAHDFNNLLSVILGNLAAARDRYAEIDGLDSYLEPAVRASRRGA 610

Query: 578 GLVRQLLAFSRRQTLRPQVIELGDVISDAAALLRRLIGERITLDV-EHARDLWPVKVDVN 636
            +  +LLAFSR+Q L+PQ +++  ++ + + LL R +   IT+ + +   + W +  D N
Sbjct: 611 DITSRLLAFSRQQPLKPQPVDVSALVREVSVLLSRSLPSSITITIPDEGGECWAI-ADAN 669

Query: 637 QFEQVIVNLAVNARDAMPDGGTLTIRTGNVPAAGCAAYGQGLPEGDYVMVEVVDTGTGIP 696
           Q E  ++NLA+NARDAMPDGG L +            + + +   DY+ V V D G G  
Sbjct: 670 QLENALINLALNARDAMPDGGRLEMDVRLRRVTDPLTFDEQVEPDDYLEVRVSDNGLGFA 729

Query: 697 PDIMDKIFEPFFSTKEVGKGTGLGLSTVYGIVQQTGGTILADSEMGRGTTFRVFLPRH-- 754
           P+ M + FEPFF+TK +G  +GLGLS VYG V+Q+ G I  DS +G G+T  + LPR   
Sbjct: 730 PEAMTRAFEPFFTTKRLG--SGLGLSMVYGFVKQSKGYITLDSRLGMGSTVTILLPRAAP 787

Query: 755 --VAGTEEEEAPKPAEPEPKAGDTTGQGRRVLLVEDEDAVRAFASRALANRGYEVLAAAS 812
             V G  EE AP P+           QG+  L+ ED+  VRA     L + G+ V+ A S
Sbjct: 788 VAVEGEAEEAAPSPS---------LWQGQLALIAEDDADVRAVLRGQLVDLGFSVVEAES 838

Query: 813 GVEALELIEREGKVDLVISDVVMPEMDGPTLLRELRSREPGLKVIFISGYAEEAFARNLP 872
           G EA +L  +   + LV+SD+VMP M G  L   +R+  P ++VI ISG++ +      P
Sbjct: 839 GDEAADLFGQIEGLSLVVSDIVMPGMSGIELAGRIRAERPSIRVILISGFSFD----TSP 894

Query: 873 PSEHFSFLPKPFSLKQLVAAVSET 896
            ++    L KP+    L AAV+ T
Sbjct: 895 EADDLVILRKPWDRSDLAAAVART 918