Pairwise Alignments

Query, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  439 bits (1128), Expect = e-126
 Identities = 276/777 (35%), Positives = 420/777 (54%), Gaps = 31/777 (3%)

Query: 469  RPASALTGERLWQLR-SPDHAAAGADVIRPLLDG-RIAEIETEESLVHPDGSAVWLAFTF 526
            R   A  G+R W+L   P+ AA    + R   D      +  +    H DGS  W  +  
Sbjct: 485  RTELAQMGDRFWELLLHPEDAAHYQALRRQQRDNCHDQPLHCQLRFRHRDGS--WRCYDI 542

Query: 527  S---LVRNADGAADHLLLVAQDISARRAAEAALRESEERFGLAVKGSDQGVWDLNVRTGS 583
                L RNA+G    ++ V +D++ +  A  +LR+SE+R+ +  +     ++  + +   
Sbjct: 543  REQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQLKL 602

Query: 584  LYLSQRAREMLGVGPDEAVDIRRPW-------------HELLHPDDRRKVAPAWKAFLSG 630
             Y+S   + +LG   D        W             + L+    +    PA  A L  
Sbjct: 603  NYVSPSVQSVLGYQADWI--FANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCS 660

Query: 631  GVPTLELDIRLRRPDGSYHDFRWNGLAARDAAGTISRAVGLLADITSSKQTERHLRLAAA 690
             +PT        R DG         +   D        +G+  DI+  ++ E+ LR+AA 
Sbjct: 661  QLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMAAT 720

Query: 691  VFANSHDGLVVTNLKSEVSAVNPAFSRITGYAEEEILGQNMRLLHSGRHDREFYRSLWSE 750
            VF +S   +++T+    +   N AFSR++GYA  E+L Q   +L          R +  +
Sbjct: 721  VFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQ 780

Query: 751  LTTAGIWQGEIWNRRKNGEIFLQQLNISTVYDDSGAAQNFVGAFQDITQAKHSEFELDRI 810
            L   G W+GE+W +R++G+ +   + I+ V DD G   ++V  F DI++ K SE  + R+
Sbjct: 781  LHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRL 840

Query: 811  AHYDPLTDLPNRTLLASLLDLAVSRPGSRCA---VLFVDLDRFKTVNDSLGHMAGDAVLQ 867
            A+YD LT LPNRTL    L  A+ +   + A   ++F+DLDRFK +NDSLGH AGD +L+
Sbjct: 841  AYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK 900

Query: 868  MAAQRIQDELEAGATLGRHGGDEFVIILEGISGPEDAATLANHVIQQ----MGRPFSMPG 923
              A R+   ++   T+ R GGDEF ++L+     E A   A HV +     + RPF +  
Sbjct: 901  DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLEN 960

Query: 924  GGEIYLGASVGISLFPEDADTPASLLQHADSALAEAKSHGRGGYAFYTQALTRGARVRME 983
              E ++ AS+GI+L P+D    + L+++AD+A+  AK  G+  + FY   +   A  R+E
Sbjct: 961  R-EFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLE 1019

Query: 984  MEADLRRALARDEFILNFQPVVNLATGRITGTEALVRWQSPTHGLVTPNRFIPLAEETGL 1043
            +E+DLR A+ ++EFIL +QP  +    R+TG EAL+RW+ PT GLV P  FIP+ EE GL
Sbjct: 1020 LESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGL 1079

Query: 1044 IEPLGNWVMEAACRQMAEWLDKGADLDFIAVNLSPRQFQRGALCEFVDDVLRRTGLPAHK 1103
            +  +G+WV+  A RQ+  W      +  ++VN+S RQF  G L   + ++L  +GLP   
Sbjct: 1080 VVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPAC 1139

Query: 1104 LEVEITESLLFDARAAAERKLRQLKDTGVRIALDDFGTGYSSLAYLKRFPISKLKIDRSF 1163
            LE+E+TES+L      A + L  LK+ G+ IA+DDFGTGYSSL YLK+FPI  LKIDR+F
Sbjct: 1140 LELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTF 1199

Query: 1164 VRDLPRA-ADAEIATAIISIARALGFSVVAEGIEDPRQHDFLKARGCDFGQGHLFSR 1219
            V  LP    DA+IA AII++A +L  +V+AEG+E   Q +FL+  GCD  QG+LF R
Sbjct: 1200 VDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGR 1256