Pairwise Alignments

Query, 281 a.a., putative D,D-dipeptide transport system permease protein DdpC from Xanthobacter sp. DMC5

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 2e-59
 Identities = 113/260 (43%), Positives = 161/260 (61%), Gaps = 7/260 (2%)

Query: 27  VLVAIAVLAPWITPYDPIASNVPAALQPP---SAAHWA---GTDQLGRDIFSRLIAATRL 80
           ++V  A+ APW+ P+DP        L PP       W    GTD+LGRD+ SRLI   RL
Sbjct: 47  LVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARL 106

Query: 81  DLGIAVSAVLLSFVAGATIGALCGYAGGRVDRSVGRLVDVLMAFPLFVLAMALVAALGNR 140
            L I +S+V++S + G  +G L G+    +  S+ RL+DV++A P  +LA+A+VA LG  
Sbjct: 107 SLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPG 166

Query: 141 VENIVIATALINLPFYIRFARAEVNVRRHAGWVEAARAGGESHATIVLAYLLPNILPAMA 200
           + N VIA A+++LP Y+R  RA V    +  +V AAR  G     ++   +LPN +  + 
Sbjct: 167 LINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLI 226

Query: 201 VQISLNLGWAILNAAGLSFLGLGVQAPTPEWGIMVAEGARFIGNGQWWLVAFPGLALMLA 260
           VQ +L+   AIL+AA L FLGLGVQ PTPEWG M+A    +I    WW+V+ PGL ++L+
Sbjct: 227 VQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERA-WWVVSLPGLTILLS 285

Query: 261 VLCFNLLGDGLRDILDPRMR 280
           VL  NL+GDGLRD LDP+++
Sbjct: 286 VLAINLMGDGLRDALDPKLK 305