Pairwise Alignments

Query, 281 a.a., putative D,D-dipeptide transport system permease protein DdpC from Xanthobacter sp. DMC5

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  242 bits (618), Expect = 6e-69
 Identities = 115/269 (42%), Positives = 179/269 (66%), Gaps = 1/269 (0%)

Query: 10  WVLRGNPVTACAAAGAVVLVAIAVLAPWITPYDPIASNVPAALQPPSAAHWAGTDQLGRD 69
           W+L+G+P+T   A   V+++ + + +PW+  +DP A ++ A L PPSAAHW GTD++GRD
Sbjct: 25  WMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRD 84

Query: 70  IFSRLIAATRLDLGIAVSAVLLSFVAGATIGALCGYAGGRVDRSVGRLVDVLMAFPLFVL 129
           +FSR++  ++  +   +  V ++ + G+ +G L G  GGR D  + R++D++++ P  VL
Sbjct: 85  LFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVL 144

Query: 130 AMALVAALGNRVENIVIATALINLPFYIRFARAEVNVRRHAGWVEAARAGGESHATIVLA 189
            MAL AALG  + N ++A A++ +PFY+R AR +  V R   +V+AA+  G S   ++  
Sbjct: 145 TMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINW 204

Query: 190 YLLPNILPAMAVQISLNLGWAILNAAGLSFLGLGVQAPTPEWGIMVAEGARFIGNGQWWL 249
           ++L N LP + VQ SL++G AIL AA L F+GLG Q P+ EWG MVA G  ++ + QWW 
Sbjct: 205 HILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLD-QWWY 263

Query: 250 VAFPGLALMLAVLCFNLLGDGLRDILDPR 278
            AFPG A++L  + FNL GDG+RD+LDP+
Sbjct: 264 CAFPGAAILLTAVGFNLFGDGIRDLLDPK 292