Pairwise Alignments

Query, 183 a.a., ECF RNA polymerase sigma factor SigF from Xanthobacter sp. DMC5

Subject, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  130 bits (328), Expect = 1e-35
 Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 4   ETDLEALMRASQSGDAEAHRALLQHLSVRLRSYFRNRLRRSGAGADDAEDLVQDTLLVLH 63
           E  L ALM     GDA AH ALL+ L   LR ++R R+R +    DD ED+VQDTL+ +H
Sbjct: 5   EGHLRALMIDGLGGDAAAHAALLRLLVPLLRGFYRRRVRGAD---DDIEDMVQDTLIAVH 61

Query: 64  TKRHTYDGSSPVLAWTYGIARYKLIDHLRLNARSLRNVQIDDMDDLADVDRYEAVDTSR- 122
           T+R TYD      AW Y +ARYK+IDH R   R  R   IDD+ D    D +EA   +R 
Sbjct: 62  TRRATYDPERAFTAWLYAVARYKMIDHFR---RVGRLRPIDDLADSLVADEFEASSIARL 118

Query: 123 ELHRALETLPRHFRLPIEYVKIEGLSIAEAAARIGMTDAAVKIGIHRGMKKLAA 176
           +++  LE LP      I  +++EGLS+AEAA+  G+ ++ VK+ +HRG+K L A
Sbjct: 119 DINDLLEQLPPKQARMIRAIRLEGLSVAEAASAEGIGESDVKVSVHRGLKALMA 172