Pairwise Alignments

Query, 183 a.a., ECF RNA polymerase sigma factor SigF from Xanthobacter sp. DMC5

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 35  SYFRNRLRRSGAGADDAEDLVQDTLLVLHTKRHTYDGSSPVLAWTYGIARYKLIDHLRLN 94
           ++ R  LR     ++ A DL QDT + L   R       P  A+   IAR  +ID  R  
Sbjct: 21  TWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEP-RAYLSSIARGLMIDQFRRR 79

Query: 95  A--RSLRN--VQIDDMDDLADVDRYEAVDTSRELHRALETLPRHFRLPIEYVKIEGLSIA 150
           A  R+ +     + + +  ++ D+   +D+   L RAL+ L    R      +++GLSI 
Sbjct: 80  ALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLAQLDGLSIV 139

Query: 151 EAAARIGMTDAAVK 164
           + A R+G++ A V+
Sbjct: 140 QVAQRLGVSRATVE 153