Pairwise Alignments

Query, 183 a.a., ECF RNA polymerase sigma factor SigF from Xanthobacter sp. DMC5

Subject, 191 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 5/142 (3%)

Query: 45  GAGADDAEDLVQDTLLVLHTKRHTYDGSSPVLAWTYGIARYKLIDHLRLNARSLRNVQID 104
           G  + DAE++ QD  +     R   D    + A+ + I++  ++D LR + RS  N +  
Sbjct: 39  GLKSSDAEEITQDVFVKFWCSRKNIDPEKCIKAYLFMISKNTILDMLRKSIRSKAN-KTY 97

Query: 105 DMDDLADVDRYEAVDTSREL----HRALETLPRHFRLPIEYVKIEGLSIAEAAARIGMTD 160
            M+ +  V+  E      EL     + L  LP   R   E  +++G+S  E A+ + ++ 
Sbjct: 98  QMNLILPVNNTENTLEYNELMGIVEKTLTALPERRRQVFEMSRLQGMSHKEIASNLNIST 157

Query: 161 AAVKIGIHRGMKKLAALLSEAR 182
             V+  +   ++    +  +A+
Sbjct: 158 KTVENHLTLALQNFRQVFQDAK 179