Pairwise Alignments

Query, 454 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

Subject, 436 a.a., Ribosomal RNA small subunit methyltransferase B from Pseudomonas putida KT2440

 Score =  131 bits (329), Expect = 5e-35
 Identities = 100/302 (33%), Positives = 137/302 (45%), Gaps = 6/302 (1%)

Query: 143 VRYECPEWGAEGLHRRFGEDFPQEMAAMLTPAPLDLRVNPIKADRVQMLSALRALGLPAE 202
           VR   P W  + L   + E +    AA     P+ LRVN     R   L+ L   G+ A 
Sbjct: 138 VRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAGIGAS 197

Query: 203 LSPLSPYGIRVNERPALNRLAMLKTGELEIQDEGSQLVAVVVDAKPGERVVDFCAGAGGK 262
               S  GI + E   +  L     G + +QDE +QL A +++  PG+RV+D C   GGK
Sbjct: 198 ACQYSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGK 257

Query: 263 TLAIAAQMKNKGHVIACDVLENRLKRAAERFRRAGLHNIETRPLASETDRWVKRHKGGFD 322
           T  +        +++A D+   RL R  E   R  L        A +T  W       F 
Sbjct: 258 TCHLLEAEAGLANMVAIDLEAKRLTRVRENLDRLQLDAELIACDARDTASWWDGKP--FQ 315

Query: 323 RVLVDAPCSGTGTWRRNPDARWRVLGPGLDALLPLQARILASAARLVKPGGRLVYATCSL 382
           R+L+DAPCS TG  RR+PD +       + AL  LQ  +L +    ++ GG L+YATCS 
Sbjct: 316 RILLDAPCSATGVIRRHPDIKMTRQADDIPALATLQGELLDALWPTLEVGGMLLYATCST 375

Query: 383 LAEENEEQVAAFLAAHPAFRVVPLSEVAPQITGSAHPDYLALTPARHDTDGFFAAVLERE 442
           L  EN E + AFLA  P  R + L+  A    G   P    L       DGF+ A L + 
Sbjct: 376 LPTENTEVIKAFLARTPGARELDLATEA----GLRQPHGRQLLAQEGGHDGFYYAKLIKI 431

Query: 443 AA 444
           AA
Sbjct: 432 AA 433