Pairwise Alignments

Query, 247 a.a., ECF RNA polymerase sigma factor SigR from Xanthobacter sp. DMC5

Subject, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 72.4 bits (176), Expect = 6e-18
 Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 77  LDAAYTLARYLTRDADAAQDIVQDAYLRAYRAFADF-KGGSARAWLLAIVRNCHLTWRDL 135
           L A    AR LT +   A+D+VQDA +RAY     + +G   R WL +I+ N  ++    
Sbjct: 12  LPALMRYARRLTGNESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSILHNVFVS--GT 69

Query: 136 RRREMQRR-APDAVAAEEGGDPEDAIDLLVDGETPETILLRRSQADRVRGTLELLPEPLR 194
           RR  ++ R   DAVA  E           V     E ++    +  ++   L  LPE  +
Sbjct: 70  RRAAVRERFRADAVAQAEP----------VAAPAQEQMV----RLHQIEAALTALPEEQQ 115

Query: 195 EVLVLRELDELSYREIADVAGVPVGTVMSRLSRARRHFADLWERVAA 241
            VL L  ++ LSY++ AD  G+P+GT++SRLSRAR     L E  +A
Sbjct: 116 TVLHLVAVEGLSYQDAADAIGIPIGTLISRLSRARAKLRALEEGASA 162