Pairwise Alignments

Query, 330 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 6e-38
 Identities = 104/324 (32%), Positives = 154/324 (47%), Gaps = 13/324 (4%)

Query: 12  PTRSARAPGGLLALAVLGAGCLLPFAGASPLLL---SLLVQAIIGAMLATGVGFLVRQNG 68
           P    RAP  LL+L V     L       PLLL   +L  + +I AM A     L+   G
Sbjct: 8   PVAKGRAPA-LLSLVVASLVAL-------PLLLPSATLATEILIFAMAALACNLLLGYTG 59

Query: 69  MVSFGHALFFGLGGYVLGVPMAHGLLPPEMAVLLALLVPALLAFVLGLVITRIPGVAFSM 128
           ++SFG  +FFG+G Y   + M H       A+L A +  A LA ++G +  R  G+ F M
Sbjct: 60  LLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVM 119

Query: 129 LSLACAQTFYEVVLKVRTLANGDDGM-SVTFP-ARLFGLDVGLLQDPRSMYLICWALLAA 186
           L+LA +Q  Y +   +     GD+G+  V  P   + G  +  L DPR  Y+    L   
Sbjct: 120 LTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLL 179

Query: 187 VLVGLWLFTRSPYGLLTLAIRSNEERARFIGYETVVPRAAVYALSAGVAGLAGVLATFYN 246
           +        RSP+G   LAIR NE RA  IGY+T   +  V+ LS  + G+AG L     
Sbjct: 180 IFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLL 239

Query: 247 GFISPDMMHWTLSGSALVMAVIGGTRAVWGPALGAVVFFFFKEIVGDATEHWPAVIGITL 306
            F     +   +S + L+M ++GGT +++G  LGA       +++ +    W  ++G+ L
Sbjct: 240 HFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVIL 299

Query: 307 IVVTLCAPAGLSGLLARLFARRAA 330
           I+V +    GL G L  L  R  A
Sbjct: 300 ILVVVFMRGGLWGGLTELGKRLLA 323