Pairwise Alignments

Query, 770 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 753 a.a., CRISPR-associated endonuclease Cas3'' from Dickeya dianthicola ME23

 Score =  432 bits (1112), Expect = e-125
 Identities = 314/781 (40%), Positives = 410/781 (52%), Gaps = 90/781 (11%)

Query: 15  GRWET---LRDHHDAVGALAGQLGERL--GWAEVTRLAGRLHDIGKLSPEFQAYIAGERA 69
           G W T   L  H   V  LA  +       WA    LAGR HD+GK  P FQ Y+   +A
Sbjct: 17  GDWSTPHYLDAHLREVAELAAAIAPTALSDWAT---LAGRWHDLGKYRPPFQDYL--RKA 71

Query: 70  SGGD--------------HSSAGSRIALDRYGPQFGTLLASIIAAHHAGLADGDELA--- 112
           SG D              HS AG+R A+   G   G +LA  I+ HHAGL +G   A   
Sbjct: 72  SGYDAENAHIEHAPGRVSHSIAGARYAITALGNGVGHILAYAISGHHAGLPNGRGDAGSL 131

Query: 113 --RRMVGAAKPAGWEDHAGPLPDMAALKPVGAMPSGGPKGFALSFLMRMLFSCLVDADFI 170
             R   G  +     + A P   + A+ PV   P        ++  +RMLFSCLVDADF+
Sbjct: 132 YNRLTTGDDEYQQAREQAIPADILQAI-PVSLPPLSEEN---IALWLRMLFSCLVDADFL 187

Query: 171 ATEAFYARSTGTEAARGGHTDLATLRTRLSTHMAALGARAAESPLNTLRARILRHALEKS 230
            TE + +        +     LA+L+ R  +HM  L  R  +SPL+ LR  IL    + +
Sbjct: 188 DTERYMSPENAARREKTASLTLASLQPRYQSHMHTLAGRNPQSPLHQLRQSILDETRQAA 247

Query: 231 PLPPGLFSLTVPTGGGKTLASLAFALDHAVRHALRRIIFVIPYTSIIEQTAQVFRDALGA 290
            L PGLFSLTVPTGGGKTLASL FALDHA+RH  +RII+ IPYTSIIEQ A VFR ALG 
Sbjct: 248 ALAPGLFSLTVPTGGGKTLASLGFALDHALRHGKKRIIYAIPYTSIIEQNAAVFRQALG- 306

Query: 291 PDDILEHHASFDWELARGARKADDEAPDAVAKLQRAAENWDVPIVVTTAVQFFESLFSNR 350
            + ++EHH + D         +DD      A+ + A ENWD P++VTT VQ FESL + R
Sbjct: 307 EEAVIEHHCNLD--------NSDD------ARARLACENWDAPVIVTTNVQLFESLHAAR 352

Query: 351 TSRCRKLHNIAESVVVLDEVQTLPLPLLLPSLAAIEQLSLNYRTSVVLCTATRPALRRID 410
            SRCRKLHN+A+SV++LDE Q LP     P    ++QL+  +  S +LCTAT+P L    
Sbjct: 353 PSRCRKLHNLADSVIILDEAQQLPRDFHAPITQVMQQLTELFGVSWLLCTATQPVLE--- 409

Query: 411 GALRDASGASMGLDLPPERELAPDRAGLYGKLRRVAVERLAEPIADDTIATRFAETAQML 470
            A R+  G  +   L   RE+    + L   LRRV V     P    T+A   A    +L
Sbjct: 410 -AQRNPFGQLLMPGLAQVREIIARPSQLADVLRRVDVRFSLTPCDWQTLAAELAAQPCVL 468

Query: 471 CIVNSRRHARALYDAIAGLPGAVHLSTLMCARHRRLVLADLREKLNA-----GAPVRLVA 525
           CIVN+R  AR LY  +A  P  +HLS  MCA HR  V+  ++++L A       P+R+++
Sbjct: 469 CIVNTRGDARTLYQRLADDPDVLHLSAQMCAEHRSQVITQIKQRLAARQQGDSRPLRVIS 528

Query: 526 TSLIEAGVDIDFPEVWRAATGLDAIAQAAGRANREGRLMDADGRPRLGRVVVFEPAEGHL 585
           T L+EAGVD+DFP VWRA  GLDAIAQAAGR NREG+L       R G V VF P     
Sbjct: 529 TQLVEAGVDLDFPTVWRAIAGLDAIAQAAGRCNREGKL------TRPGIVQVFMPPALPP 582

Query: 586 HHDIRLRWQAAEKVL-----GGHTDPLGLDTVRDYFAELYWRKGDVAKVFDAAVVGDYPG 640
              +R   QAA+  L     G  TDPL     RDYF   +  KG+     D   +G    
Sbjct: 583 AGALR---QAAQCTLEMVNAGLLTDPLSPAAFRDYFTR-FNSKGE----RDRHGIG---R 631

Query: 641 ILPAIAEAARDLAFPFRSIAEAFRMIDEGATEPVVVPWQSGPDDDDAKALLARIAAVERP 700
           +L A  ++   LA  FR  AE FR+ID+     V+VPWQ  PDD++   +   +  +E  
Sbjct: 632 LLRAEPDSEIGLALCFRDAAEKFRLIDDTGV-AVIVPWQ--PDDEEPSPVEYWLQCLESD 688

Query: 701 AAAD--LRRLQQYVVPIPKSARDEWLRRGVLVPVHVGLGAAILRFSDLSHYRAQTGIDLA 758
           A A    R+LQ+Y V +P++        G L P      A +L   + SHY   TG+ L 
Sbjct: 689 AGAHWVYRKLQRYSVNVPQTLAARLQALGALQP-----RAGLLVLLE-SHYCRNTGVKLP 742

Query: 759 D 759
           +
Sbjct: 743 E 743