Pairwise Alignments

Query, 334 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 226 a.a., L,D-transpeptidase from Sphingobium sp. HT1-2

 Score =  105 bits (262), Expect = 1e-27
 Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 48  GTYVWYPERAP-DGFVAIVINLTDQLCFVYRNGVRIGASTVSTGKEGHDTPTGVFTILGK 106
           G Y W  E AP  G V I ++L  Q   V+R+G  IGA+ +  G     +P G F I+ K
Sbjct: 88  GDYAWDEEGAPAKGPVIITVDLKAQTLSVFRDGYEIGAAVILYGATDKQSPLGAFPIMQK 147

Query: 107 DVDHHSSLYNDASMPYTERLTWSGVALHAGGLPGYPSSHGCVHLPLAFSKLVFGITHLGT 166
           D DH+SS YN+A MPY +RLT  GVA+H   +    ++HGC+ +P  F++ +FG+T +G 
Sbjct: 148 DADHYSSTYNNAPMPYMQRLTSDGVAIHGSDVKWGYATHGCIGVPKEFAQKLFGVTKVGD 207

Query: 167 PVIIAD 172
            VII +
Sbjct: 208 MVIITN 213



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 185 LIMSEGLEQQLATSATGEGAPQDATAAPEPVSMVVSRADSTITV 228
           L++++ +++  A +AT +  P +A AAP+P+ +V  R+D  + V
Sbjct: 27  LLLTDKIDRN-AGNAT-QAKPAEAAAAPKPLPLVERRSDQGMKV 68