Pairwise Alignments

Query, 205 a.a., 30S ribosomal protein S4 from Xanthobacter sp. DMC5

Subject, 206 a.a., 30S ribosomal protein S4 from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 2e-37
 Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 11/211 (5%)

Query: 1   MSKRIAAKHKIDRRMGENIWGRP-----KSPVNRREYGPGQHGQRRKGKLSDFGVQLRAK 55
           M++ I  K K+ RR G +++ +      +S  N  E  PG HGQRR G+ SD+G QLR K
Sbjct: 1   MARYIGPKCKLSRREGTDLFLKSGVRALESKCNI-EAAPGIHGQRR-GRQSDYGTQLREK 58

Query: 56  QKLKGYYGSIGEKQFHKVYVEASRLKGDTGANLIGLLERRLDAVVYRAKFVPTIFAARQF 115
           QK++  YG + E+QF   Y  A+  KG TG NL+ LLE RLD VVYR  F  T   +RQ 
Sbjct: 59  QKVRRIYGVL-ERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQL 117

Query: 116 VSHGHVKVNGKRVNIPSYLVKVDDVIEVKEAS-RQLAIVIEAQQLAERDVPDYIELDTHK 174
           VSH  + VNGK VNIPSY V+  DV+ V+E S  QL IV   +  A+R   +++++D  K
Sbjct: 118 VSHKAISVNGKTVNIPSYQVRPGDVVAVREKSLGQLRIVQALELCAQRGRVEWVDVDAAK 177

Query: 175 LTARFARIPELNEVPYPVQMEPNLVVEFYSR 205
            +  F  +P  +++     +  NL+VE YS+
Sbjct: 178 KSGVFKNVPARSDL--SADINENLIVELYSK 206