Pairwise Alignments

Query, 816 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Xanthobacter sp. DMC5

Subject, 756 a.a., ATP-dependent serine protease from Pseudomonas putida KT2440

 Score =  887 bits (2291), Expect = 0.0
 Identities = 443/758 (58%), Positives = 583/758 (76%), Gaps = 17/758 (2%)

Query: 5   SRSLEQSLHRALALANERHHEYATLEHLLLSLVDDQDAAAVMRACNVDMEKLRRNLIEYV 64
           +R LE +L+ A   A  + HE+ T+EHLLL+L+D++ AA V+RAC  +++KL+ +L E++
Sbjct: 3   NRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQEFI 62

Query: 65  DTELENLVQSGSD-DSKPTAGFQRVIQRAVIHVQSSGREEVTGANVLVAIFAERESHAAY 123
           D+    +  +  D +++PT GFQRV+QRAV HVQSSG+ EVTGANVLVAIF+E+ES A +
Sbjct: 63  DSTTPLIPVNDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQAVF 122

Query: 124 FLQEQDMTRYDAVNYISHGIAKRSGMSESRPVRGADEETETKSGDDK----QKKADALDA 179
            L++Q + R D VNYI+HGI+K  G        GA  E+E    DD+       ++ LDA
Sbjct: 123 LLKQQSVARIDVVNYIAHGISKVPG-------HGAQSESEQDMQDDEGGETSSSSNPLDA 175

Query: 180 YCINLNKKAHEGKIDPLIGRDSEITRTIQVLCRRQKNNPLFVGDPGVGKTAIAEGLAKRI 239
           Y  NLN+ A  G+IDPL+GR+ E+ R  Q+L RR+KNNPL VG+ GVGKTAIAEGLAKRI
Sbjct: 176 YASNLNELARAGRIDPLVGREQEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRI 235

Query: 240 NDGEVPEVLATATVFALDMGALLAGTRYRGDFEERLKQVVKEIEAYPNAIMFIDEIHTVI 299
            DG+VP++LA + V++LD+GALLAGT+YRGDFE+R K ++ E+   P AI+FIDEIHT+I
Sbjct: 236 VDGQVPDLLAQSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPQAILFIDEIHTII 295

Query: 300 GAGATSGGAMDASNLLKPALASGSLRCMGSTTYKEYRQYFEKDRALVRRFQKIDVAEPTV 359
           GAGA SGG MDASNLLKP L+SG +RC+GSTT++E+R  FEKDRAL RRFQK+DV+EP+V
Sbjct: 296 GAGAASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSV 355

Query: 360 PDAIEILKGLKPYFEDYHKLRYTNDAIKAAVELSARYIHDRKLPDKAIDVIDESGAAQML 419
            D + IL+GLK  FE +H + Y+++A++AA EL++RYI+DR +PDKAIDVIDE+GA Q L
Sbjct: 356 EDTVGILRGLKGRFESHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRL 415

Query: 420 LPEAKRKKTIGLKEIEATIATMARIPPKTVSKDDAEVLANLQTTLKRVVYGQNKAIEALS 479
            PEA R K I + ++E  +A +ARIPPK V+  D E+L NL+  LK  V+GQ++AI++L+
Sbjct: 416 QPEASRVKRIDVPQVEDIVAKIARIPPKHVTSSDKELLRNLERDLKLTVFGQDQAIDSLA 475

Query: 480 ASIKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLASILGVQLLRFDMSEYMERHTVS 539
            +IKL+RAGL+ P+KP+G +LF+GPTGVGKTE A+QLA  LGV+L+RFDMSEYMERHTVS
Sbjct: 476 TAIKLSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELVRFDMSEYMERHTVS 535

Query: 540 RLIGAPPGYVGFDQGGLLTDGVDQNPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNG 599
           RLIGAPPGYVGFDQGGLLT+ + + PHCVLLLDEIEKAHP++FN+LLQVMDHG LTD+NG
Sbjct: 536 RLIGAPPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNG 595

Query: 600 KQIDFRNVILIMTTNAGAADLAKPAYGFTRQKREGDDSEAISRTFAPEFRNRLDAVIPFG 659
           ++ DFRNVILIMTTNAGA   A+ + GFT Q    D  E I ++F PEFRNRLD +I FG
Sbjct: 596 RKADFRNVILIMTTNAGAETAARASIGFTHQDHASDAMEVIRKSFTPEFRNRLDTIIQFG 655

Query: 660 HLPPEVITQVVEKFVLQLEAQLADRNVTIELSDEAGTWLVDRGYDEQMGARPMARVIQEF 719
            L  E I  +V+KF+++L+AQL D+ V +E+SDEA  WL   GYD QMGARPMAR+IQ+ 
Sbjct: 656 RLSTETIKSIVDKFLIELQAQLEDKRVLLEVSDEARGWLAVSGYDVQMGARPMARLIQDK 715

Query: 720 IKTPLADLVLFGAL-KNGGHVRVVVEGEGKDSKLGFEF 756
           IK PLA+ +LFG L ++GG    VV  + +D +L F+F
Sbjct: 716 IKRPLAEEILFGELAEHGG----VVHVDLRDGELVFDF 749