Pairwise Alignments

Query, 816 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Xanthobacter sp. DMC5

Subject, 857 a.a., ATP-dependent chaperone ClpB from Enterobacter asburiae PDN3

 Score =  290 bits (741), Expect = 3e-82
 Identities = 152/271 (56%), Positives = 201/271 (74%), Gaps = 6/271 (2%)

Query: 155 VRGADEETETKSGDDKQKKADALDAYCINLNKKAHEGKIDPLIGRDSEITRTIQVLCRRQ 214
           +RG +   +  + D +Q    AL  + ++L ++A +GK+DP+IGRD EI RTIQVL RR 
Sbjct: 143 MRGGESVNDQGAEDQRQ----ALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRT 198

Query: 215 KNNPLFVGDPGVGKTAIAEGLAKRINDGEVPEVLATATVFALDMGALLAGTRYRGDFEER 274
           KNNP+ +G+PGVGKTAI EGLA+RI +GEVPE L    V ALDMGAL+AG +YRG+FEER
Sbjct: 199 KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258

Query: 275 LKQVVKEI-EAYPNAIMFIDEIHTVIGAGATSGGAMDASNLLKPALASGSLRCMGSTTYK 333
           LK V+ ++ +   N I+FIDE+HT++GAG  + GAMDA N+LKPALA G L C+G+TT  
Sbjct: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPALARGELHCVGATTLD 317

Query: 334 EYRQYFEKDRALVRRFQKIDVAEPTVPDAIEILKGLKPYFEDYHKLRYTNDAIKAAVELS 393
           EYRQY EKD AL RRFQK+ VAEP+V D I IL+GLK  +E +H ++ T+ AI AA  LS
Sbjct: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377

Query: 394 ARYIHDRKLPDKAIDVIDESGAAQMLLPEAK 424
            RYI DR+LPDKAID+IDE+ ++  +  ++K
Sbjct: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408



 Score =  264 bits (675), Expect = 1e-74
 Identities = 162/420 (38%), Positives = 241/420 (57%), Gaps = 23/420 (5%)

Query: 340 EKDRALVRRF----QKIDVAEPTVPDAIEILKGLKPYFEDYHKLRYTNDAIKAAVELSAR 395
           E D A  +R     +++D  E    +  E  K  K        ++   +  K A+E + R
Sbjct: 432 ESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491

Query: 396 Y--------IHDRKLPD--KAIDVIDESGAAQMLLPEAKRKKTIGLKEIEATIATMARIP 445
                    +   K+P+  K +++  +S    M L   K    +   EI   +A    IP
Sbjct: 492 VGDLARMSELQYGKIPELEKQLEIAMQSEGKTMRLLRNK----VTDAEIAEVLARWTGIP 547

Query: 446 PKTVSKDDAEVLANLQTTLKRVVYGQNKAIEALSASIKLARAGLREPEKPIGCYLFSGPT 505
              + + + E L  ++  L   V GQN+A+EA+S +I+ +RAGL +P +PIG +LF GPT
Sbjct: 548 VARMLEGEREKLLRMEQDLHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPT 607

Query: 506 GVGKTEVAKQLASIL---GVQLLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVD 562
           GVGKTE+ K LA+ +      ++R DMSE+ME+H+VSRL+GAPPGYVG+++GG LT+ V 
Sbjct: 608 GVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVR 667

Query: 563 QNPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKQIDFRNVILIMTTNAGAADLAK 622
           + P+ V+LLDE+EKAHPD+FNILLQV+D G+LTD  G+ +DFRN ++IMT+N G +DL +
Sbjct: 668 RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG-SDLIQ 726

Query: 623 PAYGFTRQKREGD-DSEAISRTFAPEFRNRLDAVIPFGHLPPEVITQVVEKFVLQLEAQL 681
             +G        D     +S  F PEF NR+D V+ F  L  + I  + +  + +L  +L
Sbjct: 727 ERFGELDYGHMKDLVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRL 786

Query: 682 ADRNVTIELSDEAGTWLVDRGYDEQMGARPMARVIQEFIKTPLADLVLFGALKNGGHVRV 741
            +R   I +SDEA   L + GYD   GARP+ R IQ+ I+ PLA  +L G L  G  +R+
Sbjct: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKVIRL 846