Pairwise Alignments

Query, 241 a.a., Ribosomal RNA small subunit methyltransferase E from Xanthobacter sp. DMC5

Subject, 238 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 65.9 bits (159), Expect = 7e-16
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 10/218 (4%)

Query: 21  AEI-VLEREAAHYVANVIRLGVGEDILLFNGRDGEWRATRIAGGKREVRLEVLRETRAQP 79
           AEI  L  E + +   V+RL  G+ + L +G  G + A      ++  +L+V+ +     
Sbjct: 11  AEIYTLSEEESKHCTRVLRLSHGDTVYLIDGVGGLYTAIIQDAHQKRCQLQVVDKQIEYG 70

Query: 80  PAPTLEY-AFAPLKHA-RLDYMVQKAVEMGAGILSPVITRYTQVSRVNVERMTANAIEAA 137
             P + + A AP K+  R+++ V+KAVE+G   ++ ++  +++   + ++R+   A+ A 
Sbjct: 71  KLPYVSHIAVAPTKNMDRMEWFVEKAVEIGVSEITFLLCEHSERRNLRLDRLEKIAVSAM 130

Query: 138 EQCGILSLPHVEEPRPLDSWLASLAEDRLLVFCDEASADEDPIAALKQ--ARPGPVSVLI 195
           +Q     LP + +  P   ++     +   +    A  ++D    +K       P  ++I
Sbjct: 131 KQSQKGYLPLLNDMTPFHRFVQKAVPENTFI----AHLEDDATKGIKDHYKYGQPHCIMI 186

Query: 196 GPEGGFSPEERTRIAPRGL-TLSLGPRILRADTAAVAA 232
           GPEG FS +E       G+  ++LG   LR +TAA+ A
Sbjct: 187 GPEGDFSLQEIAAAYKAGIQPVTLGQSRLRTETAALVA 224