Pairwise Alignments

Query, 241 a.a., Ribosomal RNA small subunit methyltransferase E from Xanthobacter sp. DMC5

Subject, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  227 bits (579), Expect = 1e-64
 Identities = 119/232 (51%), Positives = 157/232 (67%), Gaps = 2/232 (0%)

Query: 9   QRLHVAADLAEGAEIVLEREAAHYVANVIRLGVGEDILLFNGRDGEWRATRIAGGKREVR 68
           QRL + A L+EG       E  +Y+ANV+R+  G +ILLFNGRDGEW+A      ++++ 
Sbjct: 2   QRLFIEASLSEGVAQEATGEQFNYLANVLRMTDGAEILLFNGRDGEWKAKLSFPSRKKIS 61

Query: 69  LEVLRETRAQPPAPTLEYAFAPLKHARLDYMVQKAVEMGAGILSPVITRYTQVSRVNVER 128
           L  L +TR QP A  L Y FAPLK  R+DY+VQKAVEMGAG+L PV+T++ Q    N E+
Sbjct: 62  LVPLEQTRPQPDAAELHYLFAPLKVGRMDYLVQKAVEMGAGLLQPVMTQHVQGKIHNSEK 121

Query: 129 MTANAIEAAEQCGILSLPHVEEPRPLDSWLASLAEDRLLVFCDEASADEDPIAALKQARP 188
           + ANAIEAAEQCGILSLP V EP  L   L +  EDR +++CDE  A ++P+  L+  + 
Sbjct: 122 LRANAIEAAEQCGILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDAGQNPLPILQAVKE 181

Query: 189 GPVSVLIGPEGGFSPEERTRIAPRGLT--LSLGPRILRADTAAVAALALVNA 238
             +++L+GPEGGFS EER  +        + LGPRILRADTAAVAALA++ A
Sbjct: 182 RKIALLVGPEGGFSEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQA 233