Pairwise Alignments

Query, 343 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 341 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  532 bits (1371), Expect = e-156
 Identities = 255/337 (75%), Positives = 294/337 (87%)

Query: 1   MQTLTRLITRILELMKRYPGVIALGGFISGVGSFILVDRQQGMASWIAVIMLVSWLWLML 60
           M  +  ++ RI+EL+KRYPG+IALGGF+SG+GSFILVDRQ G+ASW+AV+MLVSW+WLML
Sbjct: 1   MPQIPHIVQRIIELLKRYPGIIALGGFLSGIGSFILVDRQAGLASWVAVLMLVSWVWLML 60

Query: 61  ENSFTQLFAQVFKREIPEPLLRYATQMIHQESLFFVLPFFFITTAWNSGQSIFTGLLGAA 120
           EN+ T LFA+ F REIP+PLLRYATQMIHQE+LFFVLPFFFITT WNSGQ +FTGLLGAA
Sbjct: 61  ENTLTGLFARTFNREIPQPLLRYATQMIHQETLFFVLPFFFITTTWNSGQLVFTGLLGAA 120

Query: 121 ALVSIVDPLYYKWLAPKRSLFLALHTFTLFAALLTALPIILHLTTAESYKLALGVAMALS 180
            LVSI DPLYYKWLAP+R LFLALHT TLFAALLTALPIILHLTTA+S+KLAL  AMALS
Sbjct: 121 GLVSITDPLYYKWLAPRRWLFLALHTLTLFAALLTALPIILHLTTAQSFKLALIAAMALS 180

Query: 181 IPSLAVSLPLRSIKGWAMLLGVTAAIGCAGWFLRSWVPPATLWMTEVAISTELQDRTPGD 240
            PSLA S P+ + +    L+ VT ++G  GW LRSWVPPATLWMTEVA+STE+ +R PGD
Sbjct: 181 FPSLASSFPISNWRRAVALVLVTLSVGAGGWLLRSWVPPATLWMTEVAVSTEVMNRQPGD 240

Query: 241 DLKEVTAAQLRSGGLYAYTAINAPRGLDERIYHVWQFNGKEVDRIALDIHGGRKEGYRAW 300
            L E+ A+++RS GLYAYTAINAPRGL+ERIYHVWQ +G+EVDRIALDIHGGRKEGYRAW
Sbjct: 241 SLDEIAASRIRSSGLYAYTAINAPRGLNERIYHVWQKDGQEVDRIALDIHGGRKEGYRAW 300

Query: 301 THKQNFPGDAVGRWQVRVLTEDGQVIGVLRFKVTDSA 337
           THKQNFP + VG+WQVRVLTEDGQVIGVLRFKV + A
Sbjct: 301 THKQNFPPNPVGKWQVRVLTEDGQVIGVLRFKVVNDA 337