Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 377 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  540 bits (1390), Expect = e-158
 Identities = 286/379 (75%), Positives = 317/379 (83%), Gaps = 4/379 (1%)

Query: 4   PTTAGAAHLDTSTTPPQLRITGDWTLAHYANLKKLSDKLDGQYDAGARIDLNGLGALDTA 63
           P T  +A LDTS+ P  LRITGDWTLAHYANLK+ S++L     A    DL+ LG LDTA
Sbjct: 3   PMTNPSATLDTSSQPACLRITGDWTLAHYANLKRESERLRSHCPADTVADLSQLGRLDTA 62

Query: 64  GASLLVELLGPTRIEQSAEQTDCSLSAADRALLKTVYRSLNDFCVPDKAPEEAAGIQVLA 123
           GASLL ELLG  R+         +L  A +ALLK VY S+ D+C+P K PE    + +L 
Sbjct: 63  GASLLAELLGSERLSHCTH----ALPEASQALLKNVYCSVQDYCIPVKEPERNVLLLLLE 118

Query: 124 RIGRAVDTVWQDSKKLLGFIGLILETFARGIFRPKRWRITPMVAHIEQTGLDAAPIVALL 183
           RIGRAV T+WQDS +LLGF+G+ILET  R  F+P RWR TP+VAHIEQTGLDAAPIVALL
Sbjct: 119 RIGRAVGTLWQDSMQLLGFVGVILETLLRRAFQPHRWRFTPVVAHIEQTGLDAAPIVALL 178

Query: 184 TFLVGAVVAFLGATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGS 243
           TFLVGAVVAFLGATVL  FGATIFTVDLVAFSFLREF VLLTAIL+AGRTASAFTAQIGS
Sbjct: 179 TFLVGAVVAFLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGS 238

Query: 244 MKANEEIDAIRTLGLDPMELLVLPRVLALLVSLPMLTFLAMLSGIVGGGVVCAVALDISP 303
           MKANEEIDAIRTLGL+PMELLV+PRVLALL+SLP+LTF+AM+ GIVGG VVCA+ LDISP
Sbjct: 239 MKANEEIDAIRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISP 298

Query: 304 AMFLSLLQSDIGVQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSI 363
           AMFLSLLQSDIGVQHFLVG+ KAP FAFLIAAIGCLEGFKVSGSAESVGAHTTS+VVQSI
Sbjct: 299 AMFLSLLQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSI 358

Query: 364 FVVIVLDALAALFFMEMDW 382
           FVVIVLDA+AALFFMEM W
Sbjct: 359 FVVIVLDAVAALFFMEMGW 377