Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 245 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  108 bits (270), Expect = 1e-28
 Identities = 65/226 (28%), Positives = 123/226 (54%), Gaps = 17/226 (7%)

Query: 143 GIFGLTNVATSQWGGLMLTLVIATVGIAGALPLGIMLALGRRSNMPAIRVVCVTFIEFWR 202
           G++GL  +      GL+ T+ ++ +    AL LG++  + R     A R +   +I  +R
Sbjct: 19  GLYGLMLLR-----GLLWTVALSLLAWTLALGLGLIAGVSRTLPNRAARYLSTVYIHCFR 73

Query: 203 GVPLITVLFMSSVMLPLFLPEGMG---------IDKLLRALIGVILFQSAYVAEVVRGGL 253
             PL+  LF+   ++P  LP   G          ++ L  L+G+ L+ +A  AE VR G+
Sbjct: 74  NTPLLVQLFLWYFVVPELLPLEWGNALKQMNPTTNQFLTVLVGLTLYTAAKAAEQVRAGI 133

Query: 254 QAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDL 313
           +++P+ Q +AA A+GLG   +   VILPQAL++VIP + + F+ +FK++++ + IGL +L
Sbjct: 134 ESVPRSQKQAAMALGLGTAAAYRHVILPQALRIVIPPLTSDFLNVFKNSAVALTIGLMEL 193

Query: 314 LNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSIHLEHKL 359
               +Q +   ++     E ++ A L++ +  +G+     H+E ++
Sbjct: 194 TGQTRQLS---EFSAHPFEAFIAATLIYMVITYGVIVLMRHIERRV 236