Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  117 bits (292), Expect = 4e-31
 Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 11/196 (5%)

Query: 157 GLMLTLVIATVGIAGALPLGIMLALGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSSVM 216
           G  LT+++  + +  A+PLGI+LAL R S+  A+      F+EF+R +PLI V++ +  +
Sbjct: 18  GAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWAFYV 77

Query: 217 LPLFLPEGMGIDKLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMG 276
           +P+ +   +        L+ + L  SAY AE  R G+ +I KGQ EAA AMG+  W++M 
Sbjct: 78  MPVLMH--IEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAMK 135

Query: 277 LVILPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADP-KWLGMATE--- 332
            V++PQA + V+P + +T+++LFKDTSLV +I + +L +   Q  +   + L M T    
Sbjct: 136 KVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMAV 195

Query: 333 -----GYVFAALVFWI 343
                GY  A LV WI
Sbjct: 196 IYWLMGYPQAKLVDWI 211