Pairwise Alignments

Query, 393 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 236 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 86.3 bits (212), Expect = 8e-22
 Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 34/255 (13%)

Query: 137 LLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAIAADGFWPFVVSIVVAIV-A 195
           +LQI+  Y+  FL    P               GL +   +A+ G    V+++ + IV  
Sbjct: 1   MLQIINDYWVYFLIGQYPNGPLG----------GLMLTLLLASCGL---VLALPLGIVLG 47

Query: 196 IVLMARWANKRFEATGVPFHKFWAGLALFIVIPALCALIFGAPLHWEMPKLQGFNFVGGW 255
           +  ++ W   R+  TG  F     GL L +VI       F A  ++ +P + G       
Sbjct: 48  LARVSPWRWLRWPVTGFVF--VVRGLPLLMVI-------FWA--YFFLPSVTG------- 89

Query: 256 VLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQAL 315
           V   +   + +AL V+ AA++AEIVR+GI+ +  GQ E AR+LGL  G  +R V++PQAL
Sbjct: 90  VKTDQFTTMLIALVVFDAAYLAEIVRAGIQGLPRGQMETARALGLGYGRAMRLVVLPQAL 149

Query: 316 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQT-GQAIEVIAITMSVYLAIS 374
           R ++P L +Q+++  K +SL   IG  E VS  A  +  Q   +  ++  I    Y  + 
Sbjct: 150 RSMLPSLVNQFVSTIKETSLGYIIGLAE-VSFIATQINTQVFTKPAQIYLILGGTYFILC 208

Query: 375 ISISLLMNWYNKRIA 389
             +S    W  +R+A
Sbjct: 209 FGLSRFAYWLERRLA 223



 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 87  GLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRNIPPLLQILFWYFA 146
           GL+ TLL+   G++LA  LG V+G+AR+SP   +    T +V V R + PLL ++FW + 
Sbjct: 24  GLMLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTGFVFVVRGL-PLLMVIFWAYF 82

Query: 147 VFLTMPG 153
              ++ G
Sbjct: 83  FLPSVTG 89



 Score = 26.2 bits (56), Expect = 0.001
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 64  GFGIAQHLIDYTESDSYARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLS 115
           G+G A  L+   ++       +  +L +L+  F+  I  T LG++IG+A +S
Sbjct: 135 GYGRAMRLVVLPQA-------LRSMLPSLVNQFVSTIKETSLGYIIGLAEVS 179