Pairwise Alignments

Query, 393 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 245 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 13/165 (7%)

Query: 224 FIVIPALCALIFGAPLHWEMPKLQGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSG 283
           + V+P L  L +G  L    P    F            L + + LT+YTAA  AE VR+G
Sbjct: 85  YFVVPELLPLEWGNALKQMNPTTNQF------------LTVLVGLTLYTAAKAAEQVRAG 132

Query: 284 IKSVSHGQTEAARSLGLRPGPTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPE 343
           I+SV   Q +AA +LGL      R VI+PQALR++IPPLTS +LN+ KNS++A  IG  E
Sbjct: 133 IESVPRSQKQAAMALGLGTAAAYRHVILPQALRIVIPPLTSDFLNVFKNSAVALTIGLME 192

Query: 344 MVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYNKRI 388
           +       +   +    E       +Y+ I+  + +LM    +R+
Sbjct: 193 LTGQ-TRQLSEFSAHPFEAFIAATLIYMVITYGVIVLMRHIERRV 236



 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 29/73 (39%), Positives = 42/73 (57%)

Query: 80  YARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRNIPPLLQ 139
           Y  + + GLL T+ ++ +   LA  LG + GV+R  PN     L+TVY+  FRN P L+Q
Sbjct: 21  YGLMLLRGLLWTVALSLLAWTLALGLGLIAGVSRTLPNRAARYLSTVYIHCFRNTPLLVQ 80

Query: 140 ILFWYFAVFLTMP 152
           +  WYF V   +P
Sbjct: 81  LFLWYFVVPELLP 93