Pairwise Alignments

Query, 343 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 282 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 68/249 (27%), Positives = 109/249 (43%), Gaps = 20/249 (8%)

Query: 3   VLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGID 62
           V K+ + + +A+A L  S    A + LD V K+G +  G       +    A GK+ G D
Sbjct: 7   VFKACVFLFAASASLA-SIVQAADSKLDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFD 65

Query: 63  ADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFPG 122
            D+ R VA  +F D +KV+F   ++  R   L + +VD+  +  T+T+SR   +    P 
Sbjct: 66  IDIGRIVAKGLFNDPSKVEFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLP- 124

Query: 123 FITYYDGIGFLVNNKLGVKSAKEL----DGATICIQAGTTTELNVSDYFRGNNLKYTPIT 178
              Y +G+G L+ N    K  ++L    DG T+ +      E  V         K     
Sbjct: 125 --YYREGVGLLLPNNSKYKEIEDLQAAGDGVTVAVLQNVYAEELVHQALP----KAKVDQ 178

Query: 179 FDTSDESAKSLESGRCDVLTSDKSQ---LFAQRSKLAAPKDYVVLPETISKEPLGPVVRN 235
           +D+ D   +++ SGR D   +D+S    L  Q         Y   P+T +       V+ 
Sbjct: 179 YDSVDLMYQAVNSGRADAAATDQSSVKYLMVQNPGRYRSPAYAWSPQTYA-----CAVKR 233

Query: 236 GDDEWLAIV 244
           GD +WL  V
Sbjct: 234 GDQDWLNFV 242