Pairwise Alignments

Query, 343 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 341 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Escherichia coli ECRC62

 Score =  490 bits (1262), Expect = e-143
 Identities = 240/342 (70%), Positives = 283/342 (82%), Gaps = 3/342 (0%)

Query: 2   KVLKSTLAIVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGI 61
           K++ +TLA  +A+ +L V+  A AGATLDAVQKKGFVQCG+SDGLPGFS  DA GK  GI
Sbjct: 3   KMMIATLA--AASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI 60

Query: 62  DADVCRAVAAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFP 121
           D DVCR VAAAVFGD TKVK++ L AKERFTALQSGEVD+LSRNTT TSSRDAGMG+ F 
Sbjct: 61  DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT 120

Query: 122 GFITYYDGIGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFDT 181
           G +TYYDGIGFL ++K G+KSAKELDGAT+CIQAGT TELNV+DYF+ NN+KYTP+TFD 
Sbjct: 121 G-VTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDR 179

Query: 182 SDESAKSLESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEWL 241
           SDESAK+LESGRCD L SD+SQL+A R KL+ P +++VLPE ISKEPLGPVVR GDDEW 
Sbjct: 180 SDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWF 239

Query: 242 AIVRWVGYAMLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGEYGKDLKVKKDWVVQIV 301
           +IVRW  +AMLNAEE GI S+NV+ +A +   PD+A LLG +G+YGKDLK+   W   I+
Sbjct: 240 SIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNII 299

Query: 302 KQVGNYGEVFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343
           KQVGNY E+FERN+G  +PL+I RG N LWNNGGIQYAPPVR
Sbjct: 300 KQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR 341