Pairwise Alignments

Query, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score = 3189 bits (8268), Expect = 0.0
 Identities = 1589/1589 (100%), Positives = 1589/1589 (100%)

Query: 1    MNVYSNAFNFNSRLNGVVDTRTGQYVCRIALATLYPQGPLEISREIALSFSLLNSDVSGN 60
            MNVYSNAFNFNSRLNGVVDTRTGQYVCRIALATLYPQGPLEISREIALSFSLLNSDVSGN
Sbjct: 1    MNVYSNAFNFNSRLNGVVDTRTGQYVCRIALATLYPQGPLEISREIALSFSLLNSDVSGN 60

Query: 61   YGAGWRLDNTEFDLATSKLTLLTGEQYQTHGLPSVGRTLVIKDRKLKDLVVQRVGESTLH 120
            YGAGWRLDNTEFDLATSKLTLLTGEQYQTHGLPSVGRTLVIKDRKLKDLVVQRVGESTLH
Sbjct: 61   YGAGWRLDNTEFDLATSKLTLLTGEQYQTHGLPSVGRTLVIKDRKLKDLVVQRVGESTLH 120

Query: 121  VIYKDGTVEILGRPSSSGPYKITAIQFENGERLRFSYLQGGPLERIQNDQGQDLLVLTYM 180
            VIYKDGTVEILGRPSSSGPYKITAIQFENGERLRFSYLQGGPLERIQNDQGQDLLVLTYM
Sbjct: 121  VIYKDGTVEILGRPSSSGPYKITAIQFENGERLRFSYLQGGPLERIQNDQGQDLLVLTYM 180

Query: 181  GALLVEADVLIDGGRYARTRIAYGNVNNQLVRVTVPYDRTQAPETAAYTFVYHRPFRNGL 240
            GALLVEADVLIDGGRYARTRIAYGNVNNQLVRVTVPYDRTQAPETAAYTFVYHRPFRNGL
Sbjct: 181  GALLVEADVLIDGGRYARTRIAYGNVNNQLVRVTVPYDRTQAPETAAYTFVYHRPFRNGL 240

Query: 241  IAISEVNSPMGGNTLISYEENGHQYANNQYIPRVVGWRQTPGGNQPPIGRKYSYSAGTNF 300
            IAISEVNSPMGGNTLISYEENGHQYANNQYIPRVVGWRQTPGGNQPPIGRKYSYSAGTNF
Sbjct: 241  IAISEVNSPMGGNTLISYEENGHQYANNQYIPRVVGWRQTPGGNQPPIGRKYSYSAGTNF 300

Query: 301  TGYPYSGGFTPGEENMYLIAGDYAYWAEETVIDVSNNDAPLYATRMTYNKFHLLTEERVT 360
            TGYPYSGGFTPGEENMYLIAGDYAYWAEETVIDVSNNDAPLYATRMTYNKFHLLTEERVT
Sbjct: 301  TGYPYSGGFTPGEENMYLIAGDYAYWAEETVIDVSNNDAPLYATRMTYNKFHLLTEERVT 360

Query: 361  REGTRTTTSLAYNILPGKLFPDQPPNLQLPRQVVRRFELVAGGNAREEVQTMETDDYGNE 420
            REGTRTTTSLAYNILPGKLFPDQPPNLQLPRQVVRRFELVAGGNAREEVQTMETDDYGNE
Sbjct: 361  REGTRTTTSLAYNILPGKLFPDQPPNLQLPRQVVRRFELVAGGNAREEVQTMETDDYGNE 420

Query: 421  LSRTEASGVCVERSYYPVAGEAGKCPADPHGLFQRFVKQERLVAAGDTPAARLTEYTHTR 480
            LSRTEASGVCVERSYYPVAGEAGKCPADPHGLFQRFVKQERLVAAGDTPAARLTEYTHTR
Sbjct: 421  LSRTEASGVCVERSYYPVAGEAGKCPADPHGLFQRFVKQERLVAAGDTPAARLTEYTHTR 480

Query: 481  VPQTGNSYFVVQESVTQPDLFSTRHTYYDTPVMLVGRLKSTSNTIDELALTSHFTYTVAA 540
            VPQTGNSYFVVQESVTQPDLFSTRHTYYDTPVMLVGRLKSTSNTIDELALTSHFTYTVAA
Sbjct: 481  VPQTGNSYFVVQESVTQPDLFSTRHTYYDTPVMLVGRLKSTSNTIDELALTSHFTYTVAA 540

Query: 541  GNLVETRRMMGREGQWLESARTLSLVNRRLLSMTRDGGCSLDLAFDVSGRLTAETVSLGK 600
            GNLVETRRMMGREGQWLESARTLSLVNRRLLSMTRDGGCSLDLAFDVSGRLTAETVSLGK
Sbjct: 541  GNLVETRRMMGREGQWLESARTLSLVNRRLLSMTRDGGCSLDLAFDVSGRLTAETVSLGK 600

Query: 601  PQQAGRRYAYHFATPEKRAHLITTDAQNNQVITYFDGVGRQVSEAQLIGTNRDQERVTRT 660
            PQQAGRRYAYHFATPEKRAHLITTDAQNNQVITYFDGVGRQVSEAQLIGTNRDQERVTRT
Sbjct: 601  PQQAGRRYAYHFATPEKRAHLITTDAQNNQVITYFDGVGRQVSEAQLIGTNRDQERVTRT 660

Query: 661  WRYDALEQLSEVVKHDYLTDGQRSLKSTYSYNHWGNSSRVTRADGSVQIDEYDPLLNLRV 720
            WRYDALEQLSEVVKHDYLTDGQRSLKSTYSYNHWGNSSRVTRADGSVQIDEYDPLLNLRV
Sbjct: 661  WRYDALEQLSEVVKHDYLTDGQRSLKSTYSYNHWGNSSRVTRADGSVQIDEYDPLLNLRV 720

Query: 721  EGVEGGERLRRYFNEHNQPVKVERLDAGGATVEVESRTYDGLGRCLSVLDNMGNKRTEFT 780
            EGVEGGERLRRYFNEHNQPVKVERLDAGGATVEVESRTYDGLGRCLSVLDNMGNKRTEFT
Sbjct: 721  EGVEGGERLRRYFNEHNQPVKVERLDAGGATVEVESRTYDGLGRCLSVLDNMGNKRTEFT 780

Query: 781  YDAFDRLMTTLEIPLDGTPQRLQKTDYAPGTSDAMISALAVDGKCLGARTYDSLGRLTSQ 840
            YDAFDRLMTTLEIPLDGTPQRLQKTDYAPGTSDAMISALAVDGKCLGARTYDSLGRLTSQ
Sbjct: 781  YDAFDRLMTTLEIPLDGTPQRLQKTDYAPGTSDAMISALAVDGKCLGARTYDSLGRLTSQ 840

Query: 841  TRGTGQTTTWEYEPGWTEPVAITSPRGHRQTLTYDKELGVPIRREMTGLPVSAYRHDATT 900
            TRGTGQTTTWEYEPGWTEPVAITSPRGHRQTLTYDKELGVPIRREMTGLPVSAYRHDATT
Sbjct: 841  TRGTGQTTTWEYEPGWTEPVAITSPRGHRQTLTYDKELGVPIRREMTGLPVSAYRHDATT 900

Query: 901  SMLTRSETDGLIHEYFQDANGHPEKDIQTANGASLTALYSHSPGGRLLHQTAADGQLSTL 960
            SMLTRSETDGLIHEYFQDANGHPEKDIQTANGASLTALYSHSPGGRLLHQTAADGQLSTL
Sbjct: 901  SMLTRSETDGLIHEYFQDANGHPEKDIQTANGASLTALYSHSPGGRLLHQTAADGQLSTL 960

Query: 961  EYDIYGRFSRITTGPMVIEQGYDTLGRPQDLTTVYEGTTVVTKVSYDAWGREAERRFEEN 1020
            EYDIYGRFSRITTGPMVIEQGYDTLGRPQDLTTVYEGTTVVTKVSYDAWGREAERRFEEN
Sbjct: 961  EYDIYGRFSRITTGPMVIEQGYDTLGRPQDLTTVYEGTTVVTKVSYDAWGREAERRFEEN 1020

Query: 1021 GVLLQVMTNTYHANSLLATRFLRDASSRVVIGETFTYDAFLRLKTYRCEGLEQPQDHLGR 1080
            GVLLQVMTNTYHANSLLATRFLRDASSRVVIGETFTYDAFLRLKTYRCEGLEQPQDHLGR
Sbjct: 1021 GVLLQVMTNTYHANSLLATRFLRDASSRVVIGETFTYDAFLRLKTYRCEGLEQPQDHLGR 1080

Query: 1081 GIVGQDFSLDGLNNITGVVTTFVDGTQDICERFFTGADPTQLTRLTHTAPPQDVTLTYDA 1140
            GIVGQDFSLDGLNNITGVVTTFVDGTQDICERFFTGADPTQLTRLTHTAPPQDVTLTYDA
Sbjct: 1081 GIVGQDFSLDGLNNITGVVTTFVDGTQDICERFFTGADPTQLTRLTHTAPPQDVTLTYDA 1140

Query: 1141 AGNLQAGPSGQVYTYNAFEQLTGVHAGSDQYSYQYDADSRQVVASRGDEPPVRLAYSGEG 1200
            AGNLQAGPSGQVYTYNAFEQLTGVHAGSDQYSYQYDADSRQVVASRGDEPPVRLAYSGEG
Sbjct: 1141 AGNLQAGPSGQVYTYNAFEQLTGVHAGSDQYSYQYDADSRQVVASRGDEPPVRLAYSGEG 1200

Query: 1201 LELLVEGNKTIRYANGDDQVMALSGGVDGVQLYANDASGSVRGITAPSEAHVRRHYTPYG 1260
            LELLVEGNKTIRYANGDDQVMALSGGVDGVQLYANDASGSVRGITAPSEAHVRRHYTPYG
Sbjct: 1201 LELLVEGNKTIRYANGDDQVMALSGGVDGVQLYANDASGSVRGITAPSEAHVRRHYTPYG 1260

Query: 1261 DTTISLDDGKARSMADLQLPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFD 1320
            DTTISLDDGKARSMADLQLPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFD
Sbjct: 1261 DTTISLDDGKARSMADLQLPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFD 1320

Query: 1321 EGGVNGYGYAACNPTNMMDPSGLWPTWLKWAFTGAALAFGVVTLGAGLAGIAAAGLAVVT 1380
            EGGVNGYGYAACNPTNMMDPSGLWPTWLKWAFTGAALAFGVVTLGAGLAGIAAAGLAVVT
Sbjct: 1321 EGGVNGYGYAACNPTNMMDPSGLWPTWLKWAFTGAALAFGVVTLGAGLAGIAAAGLAVVT 1380

Query: 1381 SAQIVAVVGATMGVIGNILGVTALSIEAVDNANGWDRSHHIKNLGWASFSFSIASWSASG 1440
            SAQIVAVVGATMGVIGNILGVTALSIEAVDNANGWDRSHHIKNLGWASFSFSIASWSASG
Sbjct: 1381 SAQIVAVVGATMGVIGNILGVTALSIEAVDNANGWDRSHHIKNLGWASFSFSIASWSASG 1440

Query: 1441 YNAWGAASKAYGAAKTGVDVGKNTAGFVVDVPLREALRSGSKLILGRTFKFGKAVTTSSK 1500
            YNAWGAASKAYGAAKTGVDVGKNTAGFVVDVPLREALRSGSKLILGRTFKFGKAVTTSSK
Sbjct: 1441 YNAWGAASKAYGAAKTGVDVGKNTAGFVVDVPLREALRSGSKLILGRTFKFGKAVTTSSK 1500

Query: 1501 AFGSTRAFVRTANLMRSLVARYDALDSPSEVDDATKGERREAQSQSRSELAHIADMPDTA 1560
            AFGSTRAFVRTANLMRSLVARYDALDSPSEVDDATKGERREAQSQSRSELAHIADMPDTA
Sbjct: 1501 AFGSTRAFVRTANLMRSLVARYDALDSPSEVDDATKGERREAQSQSRSELAHIADMPDTA 1560

Query: 1561 NRFYLAFREEALRIRQPILSELYQAAPQR 1589
            NRFYLAFREEALRIRQPILSELYQAAPQR
Sbjct: 1561 NRFYLAFREEALRIRQPILSELYQAAPQR 1589