Pairwise Alignments

Query, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 293 a.a., conserved protein of unknown function with RHS repeat-associated core domain from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 3e-15
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 1279 LPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSPFDEGGVNGYGYAACNPTNMM 1338
            L G  G+  D  T+ Y+LG+G R Y+P LM F   D +SPF  GG+N Y Y A +P N  
Sbjct: 80   LAGFKGEYCDPVTSYYLLGNGYRGYNPMLMRFANPDSVSPFGAGGINCYAYLAGDPVNAS 139

Query: 1339 DPSG 1342
            DP+G
Sbjct: 140  DPTG 143