Pairwise Alignments

Query, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 313 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 82.8 bits (203), Expect = 5e-20
 Identities = 61/175 (34%), Positives = 81/175 (46%), Gaps = 16/175 (9%)

Query: 1206 EGNKTIRYANGDDQVMALSGGV-----DGVQ--LYANDASGSVRGITAPSEAHVRRHYTP 1258
            EG   ++Y   +   +  + G      D VQ  LYA D  GSV+G    +  ++  HYT 
Sbjct: 18   EGLSLVKYVGAEASALVRAAGRTLAQRDDVQAALYAADLQGSVQGCIGRNATNLM-HYTA 76

Query: 1259 YGDTTISLDDGKARSMADLQLPGINGQRLDVATNLYVLGSGVRAYDPRLMIFLQADPLSP 1318
            YG  + + D           L    GQR D  T  Y+LG G RA+ P LM F   D LSP
Sbjct: 77   YGWDSQNTDASA--------LLRFTGQRKDTLTGHYLLGDGYRAFSPVLMRFNAPDSLSP 128

Query: 1319 FDEGGVNGYGYAACNPTNMMDPSGLWPTWLKWAFTGAALAFGVVTLGAGLAGIAA 1373
            F +GG N Y Y   +P N +DPSG  PT        + +A G+ T   GL   A+
Sbjct: 129  FGDGGANAYCYCKGDPVNKVDPSGHVPTGHVDYPPSSFIAGGLFTKRWGLRSAAS 183