Pairwise Alignments

Query, 1589 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 307 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 6e-13
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 1231 QLYANDASGSVRGITAPSEAHVRRHYTPYGDTTISLDDGKARSMADLQLPGINGQRLDVA 1290
            QL+A D   SV  ++ P        YTP+G     L  G           G NG+ +   
Sbjct: 49   QLFATDEMDSVLVVSTPDGKQKNHTYTPFGYND-KLPSGSPAI-------GFNGEFILDN 100

Query: 1291 TNLYVLGSGVRAYDPRLMIFLQADPL-SPFDEGGVNGYGYAACNPTNMMDPSGLW 1344
             +LY+LG G R +   +  F+  D   SPF  GGVN + Y   +P N  D +G+W
Sbjct: 101  IHLYLLGQGHRGFSTEMRRFIGPDNAESPFARGGVNAFAYCVNDPVNRKDETGMW 155