Pairwise Alignments

Query, 312 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter, substrate-binding protein (cluster 9, phospholipid) from Variovorax sp. SCN45

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 2/180 (1%)

Query: 1   METRAHHVMIGLFSVIVVVGAMLFGLWLAKSSVDSAFQDYEVIFNEAVSGLSQGSAVQYS 60
           ME +AH +  G F + ++   +   +W  + +  +    YE+   EAVSGL   + V+Y 
Sbjct: 1   MENKAHALAAGAFVLGLIAALIALVIWFTRDN--TVRNVYELSTREAVSGLQPQAMVRYR 58

Query: 61  GIKVGDVTSLRLDPKDPRRVLARIRLAGQTPIKEDTQAKLALTGITGTSIIQLSGGTPQS 120
           GI VG VTS+  DPK    V  RI +  + P+   + A L+  G+TG + I L      +
Sbjct: 59  GIAVGKVTSIDFDPKVKGNVRVRITVDERVPLTTSSFATLSYQGVTGLAFIALDDKGEST 118

Query: 121 AELKGKNGELPQIIASPSPIARLLNNSNDLMTSINLLLHNANHMFSRENVERLSNTLDNL 180
             LK  N + P+I   PS +A+L +    ++  +  +   AN + S  N +R ++ L+N+
Sbjct: 119 VSLKPDNDDPPRIPLKPSMLAQLQDRGEAIINQVEEVTKRANQLLSDPNQKRAADALENI 178