Pairwise Alignments

Query, 285 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

 Score =  142 bits (359), Expect = 7e-39
 Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 9/290 (3%)

Query: 1   MVSLDRFDTFKAVVEAGSLTAAADLLGQTRAVVSFNLKRLEAELGVTLLTRNTRQLALTD 60
           M  LD       VV++GSL+AAA+ LG + + +S  + ++E  LG  LL R TR++ALTD
Sbjct: 1   MDRLDDLTVLVEVVDSGSLSAAAERLGLSASAISRRIAQMENRLGTRLLARTTRRIALTD 60

Query: 61  AGERFYVRCTRMLEEARLAVEEARSEHAQLKGTLRITTTVEYALAVVAPAVEAFRRLHPD 120
           AG  F +R   +L     A +       + +GTLRIT  V +    VAP + ++ R +P 
Sbjct: 61  AGATFCLRARAILAALDEAEQSLTEMGEEPRGTLRITMPVLFGQMRVAPLLASYLRRYPG 120

Query: 121 LNIHLSTSSTHADLISERFDVAIRLGRLLDSNHRAVQLSSFDVFAVAAPSL---GGV--- 174
           +++ +S +     L+ E FD+AIR GRL DS+  A +L       VA+P      GV   
Sbjct: 121 VSLEVSLNDRVQRLVEEGFDLAIRAGRLADSSLIARRLRPLRRHVVASPDYLERRGVPQS 180

Query: 175 -STLDELEQLPKLGHGRLTELRVTDPQGGEHLYRPGHASLVADSAAVLQAFAVRGHGVAV 233
            + L   E L  L     TE         E + RP   S  ADS  +L+  AV G G+A 
Sbjct: 181 PADLVRHECLTLLSGSGRTEWEFMAGDRRE-ILRPS-GSFQADSLWLLRHAAVGGLGLAR 238

Query: 234 LPQWLVKDDLEAGRLVRLLPDHRFAPQGVYAMYPDTRHLPLKVRAFIDFM 283
           L  ++V++D+ AGRLV LL +     + ++ +YP TRH+  KVR+FI+ +
Sbjct: 239 LADFIVEEDIRAGRLVPLLSELEVTDEAIHVVYPATRHVSPKVRSFIEHL 288