Pairwise Alignments

Query, 394 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 474 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score =  130 bits (328), Expect = 6e-35
 Identities = 123/465 (26%), Positives = 191/465 (41%), Gaps = 90/465 (19%)

Query: 4   RSKVAWIFLLGFALDLVNMFVATVAYPDIARELQASVTQLAWISNAYLLGLTVIIPLSVW 63
           R  + W+  +GF +  ++  +   A P +A  L  S  ++  +  AY L + ++IP S W
Sbjct: 13  RKSLLWLVAVGFFMQTLDATIINTALPAMAASLGESPLRMQSVVVAYALTMAMLIPASGW 72

Query: 64  LAALMGERALIAASLLLFAGASVMVGQASSIETLIGWRALQGLGGGLLIPVGQAMAYRHF 123
           +A   G R +  ++++LFA  SV+   + S+  L+  R +QGLGG LL+PVG+    R  
Sbjct: 73  IADRFGTRRIFFSAIVLFALGSVLCALSHSLGQLVAARVVQGLGGALLLPVGRLSLLRTV 132

Query: 124 PAAERSQLTARVMSVALLVPALSPALGGLIVDSLSWRWIFYANLPLALITLLLTLLWITP 183
           P  E  Q  + V    L+ P L P LGG +V   SW WIF  N+P+ L   L TL ++ P
Sbjct: 133 PRGEFLQAMSFVAIPGLIGPLLGPTLGGWLVQYASWHWIFLINVPVGLAGCLATLKYM-P 191

Query: 184 DVTAKLRPKLDVGRIFQQVRSPMLRTAML-IYLCIPGV-----------FIGTSLIAILY 231
           D+   ++ +      F  V   ML   M+ I L + GV             G + IA  +
Sbjct: 192 DLRGVVQKR------FDSVGYAMLAFGMVAISLSLDGVGLRQGGVMVVLIFGFASIAAYW 245

Query: 232 LR----------------------------------------------GLGYDATQTGAL 245
           LR                                               +GY   + G +
Sbjct: 246 LRASRTPEPLFAPSLFHVPTLSIGLIGNLFSRLGSSCMPFLVPLLLQVSMGYSPVRAGLM 305

Query: 246 MLPWALASALAIFLSKQLFNRCGPKPLLLAGMALQCVGILL----LNAP----ALIIPAY 297
           MLP ALA       +  L  R G + +L+   AL  VG  +    L AP     L +   
Sbjct: 306 MLPIALAGMAMKRFATPLITRHGYRRVLVVNTAL--VGCTMASFGLTAPGQPMVLHVLQL 363

Query: 298 LLMGLGGSLCSSTAQTLAFVDIPAERMGHASALWNINRQVSFCLGAAALSALLS------ 351
           L  G   SL  +   T+   D+        ++L ++ + ++  +G AA  A+L+      
Sbjct: 364 LAFGAVNSLQFTAMNTITLKDLDGSMASSGNSLLSMVQMLAMSMGVAAAGAVLAGYNGIF 423

Query: 352 -------ALDSFAITFTMAAALTLLPLFAVLRLDASRVRSLLHPA 389
                   LD+F  TF     +T+        L  S VR+  HPA
Sbjct: 424 GTETAAHTLDAFQATFATMGLITVASALIFWHL-PSEVRA-AHPA 466