Pairwise Alignments

Query, 286 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 296 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  208 bits (530), Expect = 1e-58
 Identities = 118/288 (40%), Positives = 174/288 (60%), Gaps = 10/288 (3%)

Query: 1   MKKFFSLLS----TLLVLALAICIGRTLWVHYMETPWTRDGRVRADIINVAADVTGEVVD 56
           MKK F  +     TLL++  A+ +   + ++YM  PWTRDG +RADI+ +A DV+G +  
Sbjct: 1   MKKPFLTIGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTRDGHIRADIVQIAPDVSGLIQR 60

Query: 57  VPVRDNQLVKKGDLLMQIDPEHYRIAVKQAQSLVASRKATWEMRKVNAHRRADLDALVIS 116
           V VRDNQLV KG +L  +D + +++A++QAQ+ VA R+ T    +    R   L  LV S
Sbjct: 61  VDVRDNQLVTKGQVLFAVDQDRFKLALRQAQAAVADRQETLAQAQREYKRNRGLGNLVPS 120

Query: 117 KENRDDASNI--ADSALADYQHALAQLEAAELNLKRTQVVAAVDGYVTNLNVHRGDYARI 174
           ++  +  S +  A SALA+ Q     +++A+LNL R+ + + VDGYV +      ++   
Sbjct: 121 EQLEESQSRVARAQSALAEAQ---VTVDSAQLNLDRSVIRSPVDGYVNDRAPRTQEFVTA 177

Query: 175 GEAKMAVVDMNSFWVYGFFEETKLPHVKVGDKADMQLMSGET-LKGHVESISRGIYDRDN 233
           G   ++VVD NSF + G+FEETKL  + VG   D++++     L GHV+SI  GI DRD 
Sbjct: 178 GRPVLSVVDSNSFHIDGYFEETKLDGIHVGMGVDIRVIGDNARLHGHVQSIVAGIEDRDR 237

Query: 234 PESRELIADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVIV 281
                L+ +VNP F+WVRLAQR+PVRI  D+VP    + AG T TV +
Sbjct: 238 SSGSNLLPNVNPAFSWVRLAQRIPVRIAFDDVPADFRMIAGRTATVSI 285