Pairwise Alignments

Query, 286 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

 Score =  208 bits (529), Expect = 1e-58
 Identities = 113/277 (40%), Positives = 167/277 (60%), Gaps = 2/277 (0%)

Query: 10  TLLVLALAICIGRTLWVHYMETPWTRDGRVRADIINVAADVTGEVVDVPVRDNQLVKKGD 69
           TLLV+  A  +   + V+YM  PWTRDG +RAD+I +A DV+G +  V VRDNQ VK+GD
Sbjct: 14  TLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVKRGD 73

Query: 70  LLMQIDPEHYRIAVKQAQSLVASRKATWEMRKVNAHRRADLDALVISKENRDDASNIADS 129
           +L  ID + + +A++QA++ +  R+ T       A R   L  LV +++  +  S  A  
Sbjct: 74  VLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLVAAEQLEESQSREA-R 132

Query: 130 ALADYQHALAQLEAAELNLKRTQVVAAVDGYVTNLNVHRGDYARIGEAKMAVVDMNSFWV 189
           A +    A   ++ A+LNL R+ V + VDGY+ +      ++   G   ++VVD  S+ V
Sbjct: 133 ARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHV 192

Query: 190 YGFFEETKLPHVKVGDKADMQLMSGET-LKGHVESISRGIYDRDNPESRELIADVNPTFN 248
            G+FEETKL  + +GD  D+++M   T L+GHV+S + GI DRD      L+ +VNP F+
Sbjct: 193 DGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFS 252

Query: 249 WVRLAQRVPVRIHIDEVPEGVLLAAGITCTVIVDQTQ 285
           WVRLAQR+PVRI  DEVP+   + AG T TV + + Q
Sbjct: 253 WVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSIIEGQ 289