Pairwise Alignments

Query, 286 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 298 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  231 bits (588), Expect = 2e-65
 Identities = 126/282 (44%), Positives = 177/282 (62%), Gaps = 5/282 (1%)

Query: 3   KFFSLLSTLLVLALAICIGRTLWVHYMETPWTRDGRVRADIINVAADVTGEVVDVPVRDN 62
           K     STLLVLALA+  G  +W  YM++PWTRDG+VRA+ +++   V+G +  + V+DN
Sbjct: 16  KTLKYFSTLLVLALALVAGWWMWNFYMQSPWTRDGKVRAEQVSITPQVSGSITTLLVKDN 75

Query: 63  QLVKKGDLLMQIDPEHYRIAVKQAQSLVASRKATWEMRKVN--AHRRADLDALVISKENR 120
           Q VKKGD+L +ID   Y IA+  AQ+ +A  KA  ++ K N  A+RR  L    IS E+ 
Sbjct: 76  QFVKKGDILFRIDDTPYHIAILNAQAQLA--KAQSDLAKANNEANRRRHLSQNYISAEDL 133

Query: 121 DDASNIADSALADYQHALAQLEAAELNLKRTQVVAAVDGYVTNLNVHRGDYARIGEAKMA 180
           D A+    +  A+   A A L+ A+  L +T + A VDG+VTNL+   G+YA  G+   A
Sbjct: 134 DTANINVKAMQANVNVAEATLKQAQWQLTQTVITAPVDGWVTNLSARVGNYATTGQPIFA 193

Query: 181 VVDMNSFWVYGFFEETKLPHVKVGDKADMQLMSG-ETLKGHVESISRGIYDRDNPESREL 239
           +VD +SF+V G+FEETKL H++ G  A + L SG + L+GHV SI R IYD+       L
Sbjct: 194 LVDSHSFYVVGYFEETKLRHIREGSPAAITLYSGSQKLQGHVSSIGRAIYDQSVETDSGL 253

Query: 240 IADVNPTFNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVIV 281
           + D+ P   WVRLAQRVPVR+  D +P+ + L +G TCTV +
Sbjct: 254 VPDIKPNVPWVRLAQRVPVRVEFDRLPQDIALVSGTTCTVSI 295