Pairwise Alignments

Query, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  178 bits (452), Expect = 1e-49
 Identities = 104/278 (37%), Positives = 155/278 (55%), Gaps = 5/278 (1%)

Query: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRAL 70
           L +L+F L   +L AIN+ KV E++  P L  +P+ HP V G+  LRG +L VIDLS+A+
Sbjct: 20  LEILMFRLFGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVCGVVNLRGQTLPVIDLSQAI 79

Query: 71  GEMPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFITGVTQ 130
           G  PL       +IVT+ +RS Q   V  V +IV+     I PPP  S G + ++T +++
Sbjct: 80  GMRPLVPGPNSTIIVTEYNRSVQAFLVGGVDRIVNMNWEAILPPP-TSAGRQHYLTAISK 138

Query: 131 VEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNARILVVDDSQVALQQSVHTL 190
           V+  LV+++D+EKV+  I P   + +   L     E      +L+VDDS VAL Q   TL
Sbjct: 139 VDDQLVEIIDVEKVLAEIVPYNAKVSREKLEDPVLERARGREVLLVDDSNVALSQLRDTL 198

Query: 191 RNLGLTCHTARSAKEAIDVLLEL----QGTVEQINVVVSDIEMSEMDGYALTRTLRETPD 246
             LG+  H A    +A+++L       Q   +++ ++ +D EM EMDGY LT  +R  P 
Sbjct: 199 GQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFTDAEMPEMDGYRLTTEIRNDPR 258

Query: 247 FQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPEL 284
            + LYV+LHTSL  + N    +  G D  L+KF   +L
Sbjct: 259 LRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKL 296