Pairwise Alignments

Query, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 311 a.a., putative CheV-like chemotaxis protein from Pseudomonas putida KT2440

 Score =  176 bits (445), Expect = 8e-49
 Identities = 108/281 (38%), Positives = 154/281 (54%), Gaps = 11/281 (3%)

Query: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSRAL 70
           L +L+F L   +L AIN+ KV E++  P L  +P+ H +V G+  LRG +L VIDLS+A+
Sbjct: 20  LEILMFRLAGRQLFAINVFKVQEVLQLPKLTLMPQRHAYVCGVVNLRGQTLPVIDLSQAI 79

Query: 71  GEMPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFITGVTQ 130
           G  PL       +IVT+ +RS Q   V  V +IV+     I PPP  S G + ++T +T+
Sbjct: 80  GMRPLQPGPDSTIIVTEYNRSVQAFLVGGVDRIVNMNWESIMPPP-SSAGRQHYLTAITK 138

Query: 131 VEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNAR---ILVVDDSQVALQQSV 187
           V+  LV+V+D+EKV+  I P     +   L      VL  AR   +L+VDDS VAL Q  
Sbjct: 139 VDEKLVEVIDVEKVLAEIVPYNARVSGDKLA---DPVLARARGREVLLVDDSSVALAQLR 195

Query: 188 HTLRNLGLTCHTARSAKEAIDVLLEL----QGTVEQINVVVSDIEMSEMDGYALTRTLRE 243
            TL  LG+  H A    +A+ +L       +   E++ +V +D EM EMDGY LT  +R 
Sbjct: 196 DTLSQLGMKLHVASDGLKALRMLKGWADAGEDVCEKLLMVFTDAEMPEMDGYRLTTEIRS 255

Query: 244 TPDFQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPEL 284
               + LYV+LHTSL  + N    +  G D  L+KF    L
Sbjct: 256 DARLRQLYVVLHTSLSGSFNESMVKKVGCDNFLSKFQPDRL 296