Pairwise Alignments

Query, 1029 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1055 a.a., efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  738 bits (1906), Expect = 0.0
 Identities = 423/1021 (41%), Positives = 631/1021 (61%), Gaps = 22/1021 (2%)

Query: 10   VDHPVATLLLTFALVLLGLIAFPRLAIAPLPEAEFPTIQVTATLPGASPDTMASSVATPL 69
            +  PV T LL   L+L GL A+  L +A LP  +FP + V A+ PGAS  TMA++V  PL
Sbjct: 8    IRRPVGTSLLALGLMLAGLWAYLLLGVAALPSLDFPGVYVVASQPGASAQTMANTVLAPL 67

Query: 70   EVQFSAIPGMTQMTSSSALGSSLLTLQFTLTKSIDTAAQEVQAAINTASGKLPSDMPSLP 129
            E     IPG+ +M  +++ G + + ++FT  ++ D+AA++VQAAIN A+  LP+ MPSLP
Sbjct: 68   ERHLGRIPGVDEMYGNASEGQASVMVRFTFDRTADSAARDVQAAINAAAVDLPTGMPSLP 127

Query: 130  TWKKVNPADSPVLILSVSSNSMPSTELSDYVETLLARQISQIDGVGQINITGQQRPAIRV 189
             + K + +  P+L L+++S  +P  +L D  +T+L   ++QIDGV Q+ + G    A+R+
Sbjct: 128  QYFKFDTSQIPILFLTLTSTGLPQDQLFDLADTMLKPAVAQIDGVAQVQVFGGTPHAVRI 187

Query: 190  QASPDKLAAIGLTLADIRLAIQQSSLNLAKGAIYGENSVSTLSTNDQLFHPEDYAQLIVS 249
            +     LAA GLT  D+  A++ +++   +G +   ++  T+S +D L  P ++A+L++S
Sbjct: 188  ELDNGALAAKGLTTNDVANALRAANVTSPQGTLSDGHTQMTVSASDSLQTPAEFARLLIS 247

Query: 250  YKDGAPVQLRDIAKVINGSENAYVQAWAGDTPGVNLVISRQPGANIVETVDRIQAELPRL 309
             ++G PV+L D+AKV +G ++ Y  AW  D   V L IS++P AN V TV+ I+A LP+L
Sbjct: 248  VRNGTPVRLSDVAKVYSGQQDEYQAAWFNDARAVGLQISKRPEANAVATVEAIRARLPQL 307

Query: 310  QAMLPASVQVSVLTDRTKTIRASLHEVEVTLLIAILLVVAVMALFLRQLSATMIVSSVLG 369
            +A LP+SV ++ + D T+T +++LHEV+V LLI+I +VV VM +FLR+L  T+I +  + 
Sbjct: 308  RASLPSSVTMTPVFDLTQTTKSALHEVQVALLISIAMVVLVMLVFLRRLRPTLIATLSVP 367

Query: 370  VSLVASFALMYLMGFSLNNLTLVAIVIAVGFVVDDAIVVVENIHRHLEAGLDKREAAIKG 429
            +SL  +F +M+ +G++LN L+LVA+V+ +GFVVDDAIVV+ENI RH+E G    EAA+ G
Sbjct: 368  LSLAGAFVVMWTLGYTLNTLSLVALVLCIGFVVDDAIVVIENIVRHMERGEPPMEAALAG 427

Query: 430  AGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLAPTLAA 489
              EIGFTVVSI+ SLVA F PLLF   ++  L +EF++T T+ ++IS +VSLTL P L A
Sbjct: 428  VREIGFTVVSITLSLVAVFAPLLFGNNILIMLLREFSVTLTAAVVISALVSLTLTPALCA 487

Query: 490  LFMRAPTHHAHDKPG--------FSERLLAGYARNLRRALAHQRTM----AAIFVVTLAL 537
              +     H   +PG        F  RLL  Y R L  A+ H+R M      + ++T  L
Sbjct: 488  WLLSHEPEHTR-QPGRIEQAVERFDRRLLHIYERALDWAMHHRRIMRWQPLTLLILTFVL 546

Query: 538  AVVGYVFIPKGFFPVQDTGFVLGTSEAAADVSYPDMVAKHKALAEIVKADPAVAAFSHSV 597
                       F P +DTG +     A A++S  ++ A+  A+A+I++ADPAV      +
Sbjct: 547  GFAVAKTAGGTFMPDEDTGQLQVDISADANISPAELTARALAVAKIMQADPAVLDQLTML 606

Query: 598  GVTGSNQTIA--NGRFWIALKDR----GDRDVSASQFIDRIRPKLAKVPGIVLYLRAGQD 651
            G  G        N + ++ LK R    G+R     Q ++R+  +  K+  + + + A Q 
Sbjct: 607  GRDGGGGGAVGNNAQMFVDLKPRGSGPGERREGIKQVVERLSKQYDKLANVKVSVSAAQF 666

Query: 652  I-NLSSGPSRAQYQYVLKSNDGPTLNTWTQRLTEKLRANPAFRDLSNDLQLGGSITHISI 710
            +    SG    QY++ L S +G  L  W  R+  +LRA   FRD+S++    G    + I
Sbjct: 667  LGGGGSGDKGGQYEFQLVSTNGGDLQPWALRMVRQLRAMKEFRDVSSNFDQVGKQQLLKI 726

Query: 711  DRQAAARFGLTATDVDQALYDAFGQRQINEFQTEINQYQVVLELDTQQRGKAESLNYFYL 770
            DR+AAAR  +    +D ALY+AFGQRQ+++  ++INQY VVL     +R   ESL    +
Sbjct: 727  DREAAARLHVGVGTIDSALYNAFGQRQVSQIYSDINQYAVVLSTGAAERVSPESLLDVRV 786

Query: 771  RSPLTNEMVPLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAPGVALGDAVIMLNQAKN 830
            R+     M+PLSALA +  P + PL I H     AA +S+NLA  V     V ++ QA  
Sbjct: 787  RNE-QGRMIPLSALATI-APNLSPLRIRHHNQLEAATISYNLAKDVTQDVGVKLVEQAAY 844

Query: 831  EIGMPTTLIGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPS 890
               +P  +  +F GA Q  + + ++   L+L +++A+YI+LG+LYES  HPLTI+STLP+
Sbjct: 845  AARLPAGMRVDFTGANQRLKQAQSNGMVLLLGSILAMYIVLGILYESLGHPLTILSTLPA 904

Query: 891  AGLGALIMLSLMGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRVRGLSPEDAIYEA 950
            AG GA + + +     S+MA+I +++LIGIVKKN ILM+DFAL A+R RGL   +AI EA
Sbjct: 905  AGAGAFLAMLVTQTQISLMAIIAVLMLIGIVKKNAILMVDFALVAERERGLPAPEAIREA 964

Query: 951  CVTRFRPIIMTTLAALLGAVPLMLGTGPGAEMRQPLGIAVVGGLLVSQALTLFTTPVIYL 1010
             + RFRPI MTTL A+  A+PL +G G G+EMRQPLGIA+VGGLLVSQ LTL +TP IYL
Sbjct: 965  ALVRFRPITMTTLVAMGAALPLAIGFGIGSEMRQPLGIAIVGGLLVSQLLTLLSTPAIYL 1024

Query: 1011 Y 1011
            +
Sbjct: 1025 W 1025



 Score = 51.6 bits (122), Expect = 3e-10
 Identities = 71/331 (21%), Positives = 132/331 (39%), Gaps = 15/331 (4%)

Query: 699  LQLGGSITH---ISIDRQAAARFGLTATDVDQALYDAFGQRQINEFQTEINQYQVVLELD 755
            +Q+ G   H   I +D  A A  GLT  DV  AL  A     +   Q  ++     + + 
Sbjct: 175  VQVFGGTPHAVRIELDNGALAAKGLTTNDVANALRAA----NVTSPQGTLSDGHTQMTVS 230

Query: 756  TQQRGKAESLNYFYLRSPLTNEMVPLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAP- 814
                 +  +     L S      V LS +AKV          +      A  L  +  P 
Sbjct: 231  ASDSLQTPAEFARLLISVRNGTPVRLSDVAKVYSGQQDEYQAAWFNDARAVGLQISKRPE 290

Query: 815  --GVALGDAV-IMLNQAKNEIGMPTTLIGNFQGAAQAFQSSLASQPWLILAALVAVYIIL 871
               VA  +A+   L Q +  +    T+   F    Q  +S+L      +L ++  V +++
Sbjct: 291  ANAVATVEAIRARLPQLRASLPSSVTMTPVFD-LTQTTKSALHEVQVALLISIAMVVLVM 349

Query: 872  GVLYESFVHPLTIISTLPSAGLGALIMLSLMGQDFSIMALIGLVLLIGIVKKNGILMIDF 931
             V        L    ++P +  GA +++  +G   + ++L+ LVL IG V  + I++I+ 
Sbjct: 350  LVFLRRLRPTLIATLSVPLSLAGAFVVMWTLGYTLNTLSLVALVLCIGFVVDDAIVVIEN 409

Query: 932  ALEAQRVRGLSPEDAIYEACVTRFRPIIMTTLAALLGAVPLMLGTGPGAEMRQPLGIAVV 991
             +     RG  P +A           ++  TL+ +    PL+ G      + +   + + 
Sbjct: 410  IVRHME-RGEPPMEAALAGVREIGFTVVSITLSLVAVFAPLLFGNNILIMLLREFSVTLT 468

Query: 992  GGLLVSQALTLFTTPVIYLYLEKFFHKPKPT 1022
              +++S  ++L  TP +  +L    H+P+ T
Sbjct: 469  AAVVISALVSLTLTPALCAWL--LSHEPEHT 497