Pairwise Alignments

Query, 1029 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1050 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score =  843 bits (2178), Expect = 0.0
 Identities = 455/1029 (44%), Positives = 672/1029 (65%), Gaps = 24/1029 (2%)

Query: 6    SAWCVDHPVATLLLTFALVLLGLIAFPRLAIAPLPEAEFPTIQVTATLPGASPDTMASSV 65
            S  C+  P  T+LL+ A+V++G+ A+  + +A LP    P I V A LPGASPDTMASSV
Sbjct: 4    SELCIRRPAMTVLLSAAVVVIGIFAYFSIPVAALPSYNTPVINVNAQLPGASPDTMASSV 63

Query: 66   ATPLEVQFSAIPGMTQMTSSSALGSSLLTLQFTLTKSIDTAAQEVQAAINTASGKLPSDM 125
            A PLE QFS IPG+  ++S +  G + LTL+F  ++ ID AA +VQAA+  A  +LP ++
Sbjct: 64   ALPLEKQFSTIPGLQTISSVNTQGVTSLTLEFVSSRDIDAAAVDVQAALLRAQRQLPQEL 123

Query: 126  PSLPTWKKVNPADSPVLILSVSSNSMPSTELSDYVETLLARQISQIDGVGQINITGQQRP 185
              LP+++KVNPAD+PVL +++ S SM  +EL+DY E L++  +S IDGV Q+ + G++  
Sbjct: 124  TQLPSYRKVNPADAPVLFIALISPSMNPSELNDYAENLISPTLSTIDGVAQVGVYGRKAF 183

Query: 186  AIRVQASPDKLAAIGLTLADIRLAIQQSSLNLAKGAIYGENSVSTLSTNDQLFHPEDYAQ 245
            A+R++A+ D L A G+TL ++  A+  ++ N   G + G     T+  N QL    D+A+
Sbjct: 184  AVRIKANADLLNARGITLDELAKAVNSANANTPVGTLDGPRQTLTIQANRQLMKAADFAK 243

Query: 246  LIVSYKDGAPVQLRDIAKVINGSENAYVQAWAGDTPGVNLVISRQPGANIVETVDRIQAE 305
            LIV  ++G+PV+L ++A + +  E+    +       ++L + RQP AN V+ VD ++A 
Sbjct: 244  LIVGQRNGSPVRLDEVATIEDSFESVKTASSFNGQDSISLAVQRQPNANTVQVVDAVRAL 303

Query: 306  LPRLQAMLPASVQVSVLTDRTKTIRASLHEVEVTLLIAILLVVAVMALFLRQLSATMIVS 365
            +PR +A LP SV++ ++ DR+ +IR ++H+V++TLL  I LVV V+ LFL +L AT+I +
Sbjct: 304  IPRFKAELPQSVEIQMVNDRSLSIREAVHDVQLTLLGTIALVVLVIFLFLHRLVATLIPA 363

Query: 366  SVLGVSLVASFALMYLMGFSLNNLTLVAIVIAVGFVVDDAIVVVENIHRHLEAGLDKREA 425
            + + +SL+ + AL+Y  G+SL+N++L+ I +AVG VVDDAIVV+ENI R++E G+D   A
Sbjct: 364  ATIPISLIGAVALLYAFGYSLDNISLLGITLAVGLVVDDAIVVLENIMRYVEKGMDPFAA 423

Query: 426  AIKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLAP 485
            A++GA E+GFT+VSIS SLVA FIP+ FM GV+G LF EFA+     +L+S VVSLTL P
Sbjct: 424  ALRGAREVGFTIVSISISLVAVFIPIFFMPGVIGLLFHEFAVVVALAVLVSAVVSLTLVP 483

Query: 486  TLAA-LFMRAPT-------HHAHDKPGFS---------ERLLAGYARNLRRALAHQRTMA 528
             LA+ L  + P           H +PG +           +   Y R+L   L H+  M 
Sbjct: 484  MLASRLLKQVPRKEGAIDHEEEHPEPGTAIGRAFERGYRAVHGSYMRSLDWTLGHRNVM- 542

Query: 529  AIFVVTLALAVVGYVF--IPKGFFPVQDTGFVLGTSEAAADVSYPDMVAKHKALAEIVKA 586
             + +  L   V G++F  IPKGFFP +D G +  T+EAA D+S+  M A    +A+ ++A
Sbjct: 543  -LLMAGLTFVVTGWLFATIPKGFFPEEDIGQIQITTEAAEDISFTAMKALQDRVADALQA 601

Query: 587  DPAVAAFSHSVGVTGSNQTIANGRFWIALKDRGDRDVSASQFIDRIRPKLAKVPGIVLYL 646
            DP+V   S  VGV G   T  +GR +  LK RG+R  +  + ++ +R +  ++PGI +Y+
Sbjct: 602  DPSVDYVSSFVGVGGPTATQNSGRLFAVLKARGERP-AMGKVLESLRQRFREIPGIAVYM 660

Query: 647  RAGQDINLSSGPSRAQYQYVLKSNDGPTLNTWTQRLTEKLRANPAFRDLSNDLQLGGSIT 706
            +  Q++ L    S+A++QY L+S +   +  W  +L E++RA+PAFRD+++D Q  G   
Sbjct: 661  QPVQNLRLGGRQSKARFQYTLQSVNAGEMVPWATKLMERMRADPAFRDVTSDSQNRGLQA 720

Query: 707  HISIDRQAAARFGLTATDVDQALYDAFGQRQINEFQTEINQYQVVLELDTQQRGKAESLN 766
             + IDR  A   G+   D+  ALY+A+G RQI       N YQV+L      R   E + 
Sbjct: 721  TLDIDRDKAGVLGVAVGDLRTALYNAYGDRQIGSIYGASNTYQVILSAADNDRQFEEDVA 780

Query: 767  YFYLRSPLTNEMVPLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAPGVALGDAVIMLN 826
               +RS  T ++VPLSA + V   TVGP S++H G   A  +SFNL P V LG+A   ++
Sbjct: 781  RLSVRSN-TGKLVPLSAFSTV-KRTVGPTSVNHQGQLQAVTVSFNLGPDVPLGNATAKID 838

Query: 827  QAKNEIGMPTTLIGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIIS 886
            Q K+E+ MP ++I  + G A  FQSS +SQ  L++ A++ +Y++LGVLYES++HP+TI++
Sbjct: 839  QFKDELKMPQSIITTYGGDAAVFQSSQSSQAVLLVLAVLVIYVLLGVLYESYIHPITILA 898

Query: 887  TLPSAGLGALIMLSLMGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRVRGLSPEDA 946
             LPSA +GALI L + G D +++A IG++LLIGIVKKN I++IDFAL+AQR  GLSP DA
Sbjct: 899  GLPSAAVGALISLKIFGFDLTLIATIGILLLIGIVKKNAIMLIDFALDAQRTEGLSPVDA 958

Query: 947  IYEACVTRFRPIIMTTLAALLGAVPLMLGTGPGAEMRQPLGIAVVGGLLVSQALTLFTTP 1006
            I EAC  RFRPI+MTTLAAL+GA+PL LG G GAE+RQPLG+AVVGGL+ SQ +TL+ TP
Sbjct: 959  IREACRLRFRPILMTTLAALMGALPLALGLGAGAELRQPLGVAVVGGLIFSQVITLYITP 1018

Query: 1007 VIYLYLEKF 1015
             IYL L+++
Sbjct: 1019 AIYLALDRY 1027