Pairwise Alignments

Query, 1029 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1041 a.a., MdtB/MuxB family multidrug efflux RND transporter permease subunit from Erwinia tracheiphila SCR3

 Score =  969 bits (2505), Expect = 0.0
 Identities = 501/1015 (49%), Positives = 713/1015 (70%), Gaps = 7/1015 (0%)

Query: 5    PSAWCVDHPVATLLLTFALVLLGLIAFPRLAIAPLPEAEFPTIQVTATLPGASPDTMASS 64
            PS   +  PVAT LL  A++L G++A+  L ++ LPE ++PTIQV    PGASPD + SS
Sbjct: 14   PSRQFILRPVATTLLMVAILLAGILAWRVLPVSALPEVDYPTIQVVTLYPGASPDVVTSS 73

Query: 65   VATPLEVQFSAIPGMTQMTSSSALGSSLLTLQFTLTKSIDTAAQEVQAAINTASGKLPSD 124
            V  PLE QF  + G+ QM+S S  G+S++TLQF L+  +D A QEVQAAIN A+  LP+D
Sbjct: 74   VTAPLERQFGQMSGLKQMSSQSTGGASVITLQFQLSLKLDVAGQEVQAAINAATNLLPAD 133

Query: 125  MPSLPTWKKVNPADSPVLILSVSSNSMPSTELSDYVETLLARQISQIDGVGQINITGQQR 184
            +P+ P + KVNPAD P++ L+V++ SMP T++ D VET +A++ISQ+ GVG + ++G QR
Sbjct: 134  LPNPPVYSKVNPADPPIMTLAVTTTSMPLTQVQDMVETRIAQKISQVPGVGLVTLSGGQR 193

Query: 185  PAIRVQASPDKLAAIGLTLADIRLAIQQSSLNLAKGAIYGENSVSTLSTNDQLFHPEDYA 244
            PA+RV+ +   LAA GL    +R  I  +++N AKG++ G     TLS NDQ+   EDY 
Sbjct: 194  PAVRVKLNAQALAARGLDSETVRSVIGSANVNSAKGSLDGPERSVTLSANDQMKSAEDYR 253

Query: 245  QLIVSYKDGAPVQLRDIAKVINGSENAYVQAWAGDTPGVNLVISRQPGANIVETVDRIQA 304
             LIVSY++G+PV+LRDIA +  G+EN ++ AWA   P + L + RQPGANI+ T D I+A
Sbjct: 254  LLIVSYQNGSPVRLRDIATIEQGAENRWLGAWANQRPAIVLNVQRQPGANIITTADSIRA 313

Query: 305  ELPRLQAMLPASVQVSVLTDRTKTIRASLHEVEVTLLIAILLVVAVMALFLRQLSATMIV 364
             LP L A LPASV + VLTDRT  IRAS+ +V++ L++AI LVV ++ LFLR ++AT+I 
Sbjct: 314  MLPGLVATLPASVDMQVLTDRTTNIRASVKDVQIELVLAIALVVMIIYLFLRNIAATLIP 373

Query: 365  SSVLGVSLVASFALMYLMGFSLNNLTLVAIVIAVGFVVDDAIVVVENIHRHLEAGLDKRE 424
            +  + +SL+ +FA++Y +G+S+NNLTL+A+++A GFVVDDAIVV+ENI R++E G    +
Sbjct: 374  AIAVPLSLIGTFAVIYFLGYSINNLTLMALIVATGFVVDDAIVVIENISRYIEKGDKPLD 433

Query: 425  AAIKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLA 484
            AA+KG+GEIGFT++S++FSL+A  IPLLFMG +VGRLF+EFA+T   +ILIS VVSLTL 
Sbjct: 434  AALKGSGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVSILISAVVSLTLT 493

Query: 485  PTLAALFMRAPTHHAHDK-----PGFSERLLAGYARNLRRALAHQRTMAAIFVVTLALAV 539
            P + A  + A +    ++         +R++A Y R L + L H     ++ + TLAL V
Sbjct: 494  PMMCARMLNADSLRKQNRFSRASEALFDRVIAAYGRILTKVLNHPWLTLSVALATLALTV 553

Query: 540  VGYVFIPKGFFPVQDTGFVLGTSEAAADVSYPDMVAKHKALAEIVKADPAVAAFSHSVGV 599
            + +V IPKGFFPVQD G + GT +A   VSY +M  + + +A  +  DPAV + +  +GV
Sbjct: 554  LLWVIIPKGFFPVQDNGIIQGTLQAPQSVSYENMAQRQQQVAARIIKDPAVESLTAFIGV 613

Query: 600  TGSNQTIANGRFWIALKDRGDRDVSASQFIDRIRPKLAKVPGIVLYLRAGQDINLSSGPS 659
             G+N  + +GR  I LK   +RD    Q I R++ ++A++PG+ LYL+  QD+ + +  S
Sbjct: 614  DGTNSALNSGRLQINLKPLSERDDRIQQVIKRLQHEVAQLPGVDLYLQPIQDLTIDTTVS 673

Query: 660  RAQYQYVLKSNDGPTLNTWTQRLTEKLRANPAFRDLSNDLQLGGSITHISIDRQAAARFG 719
            R QYQ+ L++N    L+ W  +L  KL A P  +D+S+D Q  G    I +DR +A+R G
Sbjct: 674  RTQYQFTLQANTLDALSLWVPQLMAKLSALPQLQDISSDWQNRGLEAFIRVDRDSASRLG 733

Query: 720  LTATDVDQALYDAFGQRQINEFQTEINQYQVVLELDTQQRGKAESLNYFYLRSPLTNEMV 779
            +   DVD ALY+AFGQR I+   T+ +QY+VVLE DT+      +L+  +L+S     +V
Sbjct: 734  IGMADVDNALYNAFGQRLISTIYTQSSQYRVVLEHDTRSTPGLAALDAIHLKSS-NGTVV 792

Query: 780  PLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAPGVALGDAVIMLNQAKNEIGMPTTLI 839
            PLSALA+ +    GPL I+H   FP+   SFN++ G +L  AV  +++A+ E+ MP  ++
Sbjct: 793  PLSALARPE-QRYGPLGINHLDQFPSTTFSFNVSNGYSLEQAVNAISKARQELAMPAEIM 851

Query: 840  GNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALIML 899
              FQG+  AFQ++L+S  WLI+AA+V +YI+LGVLYESF+HP+TI+STLP+AG+GAL+ L
Sbjct: 852  TQFQGSTLAFQAALSSTVWLIIAAIVVMYIVLGVLYESFIHPITILSTLPTAGVGALLAL 911

Query: 900  SLMGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRVRGLSPEDAIYEACVTRFRPII 959
             L G +  ++A+IG++LLIGIVKKN I+MIDFAL A+R RG++P +AIY+AC+ RFRPI+
Sbjct: 912  MLCGNELDVIAIIGIILLIGIVKKNAIMMIDFALAAERERGMAPYEAIYQACLLRFRPIL 971

Query: 960  MTTLAALLGAVPLMLGTGPGAEMRQPLGIAVVGGLLVSQALTLFTTPVIYLYLEK 1014
            MTTLAAL GA+PLML +G GAE+RQPLGIA+VGGL+ SQ LTLFTTPVIYL  ++
Sbjct: 972  MTTLAALFGALPLMLSSGQGAELRQPLGIAMVGGLIASQVLTLFTTPVIYLLFDQ 1026