Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 471 a.a., porin from Pseudomonas simiae WCS417

 Score =  205 bits (521), Expect = 3e-57
 Identities = 146/468 (31%), Positives = 227/468 (48%), Gaps = 42/468 (8%)

Query: 3   NSLTFTPLFLAIAATIVP--LAHAADSTPADGFVEGAHLNINTRNYYMNRDR-------- 52
           +S+T T      +   VP  LA  +  + A GF++G  L   TRN+Y N  +        
Sbjct: 14  SSITATAYAETTSQDFVPTTLAGTSAQSEAKGFIDGQSLGGTTRNWYSNEMKFRGQKFGY 73

Query: 53  --------RDIHTDDSKE--WGQGFLGIFESGYTQGTVGFGLDAHAMLGLKL-----DGG 97
                    D+ T+ S+   W QG +  + SG+TQGTVG   +  A   + L     D  
Sbjct: 74  YKNAADKAADVKTNVSRRYNWAQGTILNYSSGFTQGTVGVATEVAAYNYIALIDDQKDIA 133

Query: 98  GGTDGSSILPYGSGNGKAPGSFSTAG-GTLKMRAFDTELKAGDLFLNNPVIAGGATRMLP 156
           GG++ +    YG     A G +S  G   +K R  +T L AG    ++ ++     R LP
Sbjct: 134 GGSNRTLAHTYGD----AVGQWSKLGLANVKFRVSNTTLTAGRQNFSSGIMDTIGNRALP 189

Query: 157 QTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSF 216
            +F GVS  +       F+GG         +    +  + Y +    TD  +    G ++
Sbjct: 190 SSFEGVSFNSEEFSNLSFQGGVFDRVSPRTEQSLSKFRSEYSSSGVETDKVYT--LGFNY 247

Query: 217 SGIDGLTSNLYAAELKDVWNQYYYDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDN 276
             +  L ++++AA +KD WNQYY+   +    ++++SL  GL+YY T D G+ L+G+IDN
Sbjct: 248 QPLKSLKTSVFAANVKDFWNQYYFGATHELGDSQVLSLTTGLNYYKTVDEGKKLMGEIDN 307

Query: 277 NTYSLHFTVDVGHHSVTAAYQRVNGNTPFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLK 336
           +TYSL   +    HS+T +YQ VNGN  FDY+ + + +YL NS   SDFNGPNE+S+++ 
Sbjct: 308 DTYSLSLGLTHQAHSLTFSYQEVNGNEYFDYLHETNGIYLANSLT-SDFNGPNEKSFQVA 366

Query: 337 YAYNFGGLGLPGLT----SAVSY-ISGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDID 391
           YA N    G+PGL     SA  + I G         +   Y+   + +G+   H E  I 
Sbjct: 367 YAINMAEYGVPGLKFNIYSARGWGIDGTHYRGDNGVKDFAYNGIQAQNGE--HHQEYGIG 424

Query: 392 LKYVVQGGKAKDLAVRLQWATNRGSNGYSAVDRDVDEYRVIVDYPINV 439
             Y +Q G  K   VR  + T+R S   S  D ++ E+R++   P N+
Sbjct: 425 SSYAIQSGPLKATTVRATYVTHRASENQS--DGNLREFRLVTTIPFNI 470