Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 454 a.a., porin from Pseudomonas simiae WCS417

 Score =  228 bits (580), Expect = 4e-64
 Identities = 158/460 (34%), Positives = 220/460 (47%), Gaps = 53/460 (11%)

Query: 16  ATIVPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRD-IHTDDSKEWGQGFLGIFESG 74
           A  V L   A    A GFVE +   +  RN+Y+N D R+    + ++EWGQGF   F SG
Sbjct: 7   ALAVALGAIAQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGANKNEEWGQGFDLRFISG 66

Query: 75  YTQGTVGFGLDAHAMLGLKLDGGGGTDGSSILPYGSG-------------NGKAPGSFST 121
           YTQGTVGFG+DA  +LG++LD GGGT+G++  P G+              NGKA   +S+
Sbjct: 67  YTQGTVGFGVDAIGLLGVRLDSGGGTNGAT-KPSGANPGSYGGTIFPSEHNGKAVNDYSS 125

Query: 122 AGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASF 181
            G T K +   TELK G L    PVI     R+LPQTF+G  +T + +      GGQ   
Sbjct: 126 LGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEK 185

Query: 182 TKLYNQSGHRRIGTSYGALPEHT--DSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYY 239
            K  N S +  +  S       T  DS    +AG  +     LT+  Y   L+D + Q++
Sbjct: 186 AKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHF 245

Query: 240 YDLDYTYVVNEMISLNPGLHYYHTQDTG-----------------QSLLGDIDNNTYSLH 282
             L + + +   + L   L Y+++ D G                 ++  G +DNN YS  
Sbjct: 246 LGLTHNWAIGPGV-LKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGL 304

Query: 283 FTVDVGHHSVTAAYQRVNGNTPFDYIAQGD--SVYLDNSQQYSDFNGPNERSWKLKYAYN 340
           F   V  H+    YQ  NG++ F ++ QGD  S YL    Q   F    ER+W+ +YAY+
Sbjct: 305 FLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYD 364

Query: 341 FGGLGLPGLTSAVSYISGKTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGK 400
           F  +G+PGLT+ V Y+ G    T  +  SR               WERDI + YV+  G 
Sbjct: 365 FAKVGVPGLTAGVVYLKGSDIDTVANTASR-------TQFNGQSEWERDITVAYVIPEGP 417

Query: 401 AKDLAV---RLQWATNRGSNGYSAVDRDVDEYRVIVDYPI 437
            K+L V      W T+       A  RD DE R+IV Y I
Sbjct: 418 LKNLGVAWKNAMWRTD------IAGARDQDENRLIVSYSI 451