Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 9e-58
 Identities = 140/441 (31%), Positives = 224/441 (50%), Gaps = 35/441 (7%)

Query: 6   TFTPLFLAIAATIVPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSK---- 61
           TF P  L +A  +  LA    +    GF+E A  N+N RN++ NR+    +T+ +K    
Sbjct: 3   TFHPRRLLLATAVASLALPVVAEE-HGFLEDASANLNLRNFFFNRN----YTNPTKAQGG 57

Query: 62  --EWGQGFLGIFESGYTQGTVGFGLDAHAMLGLKLDGGGGTDGSSILPYGSGNGKAPGSF 119
             EW Q F+   +SG+TQGTVGFG+D   +  LKLDGG GT G+ +LP    +G+    F
Sbjct: 58  AQEWTQSFILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDH-DGRPADEF 116

Query: 120 STAGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQA 179
              G   K R   TE+K G+     P++     R LPQT RG  +T+  +DG    GGQ 
Sbjct: 117 GRLGVAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQF 176

Query: 180 SFTKLYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSFSGIDGLTS-NLYAAELKDVWNQY 238
                 + S    + + +G     +D    N+ G  ++  D  T   L+ A+LKD+++Q 
Sbjct: 177 RANSPRDDSSMNDL-SMFGKTAFTSD--RFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQ 233

Query: 239 YYDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAYQR 298
           + +L ++  +    +L   L +++ +D G +  G++DN T+S  F+   G ++     Q+
Sbjct: 234 FINLIHSQPLGNW-TLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQK 292

Query: 299 VNGNTPFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYISG 358
           + GN+ +  +       L N    + ++   E+SW++++ YNF  LG+PGLT    YISG
Sbjct: 293 LTGNSAWMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISG 352

Query: 359 KTDLTKVDPQSRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRGSNG 418
                         S  ++    D K W R+ +L Y VQ G  K+L VRL+ ++ R    
Sbjct: 353 --------------SNVHTGTVTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMR--RD 396

Query: 419 YSAVDRDVDEYRVIVDYPINV 439
           YS  + + DE R+IV YPI++
Sbjct: 397 YS--NNEFDENRLIVSYPISL 415