Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  232 bits (591), Expect = 2e-65
 Identities = 146/411 (35%), Positives = 216/411 (52%), Gaps = 27/411 (6%)

Query: 32  GFVEGAHLNINTRNYYMNRDRRDIHTDDSK--EWGQGFLGIFESGYTQGTVGFGLDAHAM 89
           GF+E A   +  RNYY NRD RD      K  EW QGF+  F SGYT G +GFGLD  A+
Sbjct: 31  GFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFIFKFSSGYTPGLIGFGLDGIAL 90

Query: 90  LGLKLDGGGGTDGSSILPYGSGNGKAPGSFSTAGGTLKMRAFDTELKAGDLFLNNPVIAG 149
            G+KLD GGGT GS +LP    +G+A   +  AG   K+R   TELK G+L  + P++  
Sbjct: 91  FGVKLDSGGGTSGSELLPV-HDDGRAADDYGRAGLAAKLRMSATELKVGELLPDIPLLRY 149

Query: 150 GATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRRIGTSYGALPEHTDSQHM 209
              R+LPQTFRG  L +  ++G   + GQ     L + S  + +  S  A P  T S   
Sbjct: 150 DDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDL--SAWAAPGVT-SDGF 206

Query: 210 NWAGVSFSGIDGLT-SNLYAAELKDVWNQYYYDLDYTYVVNEMISLNPGLHYYHTQDTGQ 268
           N+AG  +      T    + ++L+D++ Q Y++L ++  V E  +L   L Y+  +D GQ
Sbjct: 207 NYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEW-TLGANLGYFIDRDDGQ 265

Query: 269 SLLGDIDNNTYSLHFTVDVGHHSVTAAYQRVNGNTPFDYIAQGDSVYLDNSQQYSDFNGP 328
           + +GDI + T     +     H++    Q+V+G++ +  +       L N     +F+  
Sbjct: 266 ARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMFNGNFSNA 325

Query: 329 NERSWKLKYAYNFGGLGLPGLTSAVSYISGKTDLTKVDPQSRGYSAWYSADGKDAKHWER 388
           +ERSW+++Y YNF  LG+PGL + V Y  G+   T              A G + K WER
Sbjct: 326 DERSWQVRYDYNFAALGVPGLLAMVRYGHGENATT--------------AAGSNGKEWER 371

Query: 389 DIDLKYVVQGGKAKDLAVRLQWATNRGSNGYSAVDRDVDEYRVIVDYPINV 439
           D ++ Y  Q G  K+L +RL  ATNR S      + D+D+ R+IV YP+ +
Sbjct: 372 DAEVNYTFQSGALKNLNIRLNNATNRRS-----FNSDLDQTRLIVSYPLTL 417