Pairwise Alignments

Query, 440 a.a., porin from Pseudomonas simiae WCS417

Subject, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 2e-58
 Identities = 137/438 (31%), Positives = 219/438 (50%), Gaps = 32/438 (7%)

Query: 21  LAHAADSTPADGFVEGAHLNINTRNYYMNR---------------DRRDIHTDDSKEWGQ 65
           L  +++   A GF++G  L+ +TRN+Y                   R D H+ ++  W Q
Sbjct: 34  LKSSSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSREN--WVQ 91

Query: 66  GFLGIFESGYTQGTVGFGLDAHAMLGLKLDGGG-GTDGSSILPYGSGNGKAPGSFSTAG- 123
           G +  + SG+TQGTVGF ++A     + L        G +       +G   G +S  G 
Sbjct: 92  GTILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVGQWSKLGL 151

Query: 124 GTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTK 183
           G +K R  +T L  G   ++ P+IA    R LP +F+G  L +   D    + G      
Sbjct: 152 GNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVS 211

Query: 184 LYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLD 243
              +    +  + Y A    TD    + AG+++     L+++LYA +++D WNQYY+  +
Sbjct: 212 PRTEQSLSKFRSEYSATGVETD--RASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGAN 269

Query: 244 YTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAYQRVNGNT 303
           +    + ++SL+ GL+YY T D G   +G IDN+TYSL   +    H+++A++Q+VNGN 
Sbjct: 270 HVLGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNE 329

Query: 304 PFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYISGKTDLT 363
            FDY+ + + ++L NS   SDFNGPNE+S +L Y  N    G+PGL   +    G     
Sbjct: 330 YFDYLHETNGIFLANS-LLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARG----W 384

Query: 364 KVD-PQSRGYSAWYSADGKDAK-HWERDIDLKYVVQGGKAKDLAVRLQWATNRGSNGYSA 421
            +D    RG +  Y  +G D + H+E  I   Y +Q G  KD ++R  + T+R S     
Sbjct: 385 GIDGTHYRGTA--YDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQG- 441

Query: 422 VDRDVDEYRVIVDYPINV 439
            D  +DE+RV+   P N+
Sbjct: 442 -DGSLDEFRVVTTIPFNI 458