Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 1075 a.a., carbamoyl-phosphate synthase large subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 56.6 bits (135), Expect = 3e-12
 Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 15/258 (5%)

Query: 59  DDFIARLQAEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQV 118
           +D +  +  EK  +  I+ +G G     +   LE AG+P  G+   +  LA D+ R + +
Sbjct: 624 EDVLEIVHVEK-PKGVIVQYG-GQTPLKLARALEAAGVPIIGTSPDSIDLAEDRERFQHM 681

Query: 119 WHSLGIPTPRHSVLCSEDDCISAAKELGLPLIVKPAHEGSSIGMAKVNSAAELI----DA 174
              +G+  P +    + D+ ++ A+E+G PL+V+P++      M  V+  A+L     DA
Sbjct: 682 IEKIGLKQPPNRTARNADEALALAREIGYPLVVRPSYVLGGRAMEVVHDDADLSRYIRDA 741

Query: 175 WKAASTYDSQVLVEQWIQGPEYTIATLRGQVLPPIALGTPHTFYDYDAKYLASDTQYRIP 234
            K ++  DS VL+++++         +       + +G      +    +    +    P
Sbjct: 742 VKVSN--DSPVLLDRFLDHAVEVDVDVIADAEGTVLIGGIMEHIEEAGVHSGDSSCSLPP 799

Query: 235 CGLDASKEQELMDLTAKACEALGIAGWARADVMQDDQGD-FWFLEVNTAPGMTDHSLVPM 293
             L A  + E+    +   + L + G          QGD  + LEVN     T    VP 
Sbjct: 800 YSLSAKIQDEMRRQVSAMAKELKVIGLMNTQFA--IQGDTVYILEVNPRASRT----VPF 853

Query: 294 AARAAGLDFQQLVLAILA 311
            ++A G+   ++   ++A
Sbjct: 854 VSKATGVSLAKIAARVMA 871



 Score = 35.4 bits (80), Expect = 6e-06
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 71  DRAFIILHGRGGEDG-------SMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLG 123
           +R   +L   GG+ G       +  G+LE   +   G+   A  +A D+   K+    +G
Sbjct: 81  ERPDAVLPTMGGQTGLNCALDLADHGVLEKYHVELIGARREAIRMAEDRELFKRAMTEIG 140

Query: 124 IPTPRHSVLCSEDDCISAAKELGLPLIVKPAHE--GSSIGMAKVNSAAELIDAWKAASTY 181
           + +P+  V  + +  +     LG P+I++P+    G+  G+A      E I       + 
Sbjct: 141 LESPKSDVARNFEHAVEIQARLGFPVIIRPSFTLGGTGGGIAYNKEEFEAIVKRGLEMSP 200

Query: 182 DSQVLVEQWIQG-PEYTIATLR 202
             +VL+++ + G  EY +  +R
Sbjct: 201 THEVLIDESVLGWKEYEMEVVR 222