Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 364 a.a., D-alanine-D-alanine ligase A from Escherichia coli BL21

 Score =  155 bits (391), Expect = 2e-42
 Identities = 114/353 (32%), Positives = 167/353 (47%), Gaps = 61/353 (17%)

Query: 19  RVAVLFGGKSAEREVSLKSGNAVLDALQSA--GVNAFGID------VGDDFIARLQAEK- 69
           RV ++FGGKSAE EVSL+S   ++DA+  +   V   GID      V D     L A+  
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDP 64

Query: 70  ----------------------------------IDRAFIILHGRGGEDGSMQGLLECAG 95
                                             +D  F I+HG  GEDGS+QG+L  A 
Sbjct: 65  AHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVAN 124

Query: 96  IPYTGSGVLASALAMDKLRTKQVWHSLGI---------PTPRHSVLCSEDDCISAAKELG 146
           +P+ GS VLASA  MDK  TK++    G+            RH++  +E        +LG
Sbjct: 125 LPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAE-----VESKLG 179

Query: 147 LPLIVKPAHEGSSIGMAKVNSAAELIDAWKAASTYDSQVLVEQWIQGPEYTIATLRGQVL 206
           LPL VKPA++GSS+G++KV S  +   A   A  +D +V+VEQ I+G E   A L     
Sbjct: 180 LPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNP 239

Query: 207 PPIALG---TPHTFYDYDAKYLASD-TQYRIPCGLDASKEQELMDLTAKACEALGIAGWA 262
                G       FY YD KY+  D  +  +P  +      ++  +  +A + LG AG A
Sbjct: 240 QASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMA 299

Query: 263 RADVMQDDQGDFWFLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSIE 315
           R DV    + +    E+NT PG T+ S+ P   +A+GL +  L+  ++  ++E
Sbjct: 300 RVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALE 352