Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

 Score =  198 bits (504), Expect = 1e-55
 Identities = 131/303 (43%), Positives = 170/303 (56%), Gaps = 13/303 (4%)

Query: 20  VAVLFGGKSAEREVSLKSGNAVLDALQSAGVNAFGIDVGDDFIARLQAEKIDRAFIILHG 79
           VAVL GG S+ER VSL SGNA   AL+  G     +DVG D  A L   + D AF  LHG
Sbjct: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRPDVAFNALHG 65

Query: 80  RGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVLCSEDDCI 139
             GEDG++QG+LE   IPYT SGVLASALAMDK + K+V  + GIP     V+   D   
Sbjct: 66  PFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFD--F 123

Query: 140 SAAKELGLPLIVKPAHEGSSIGMAKVNSAAELIDAWKAAS--TYDSQVLVEQWIQGPEYT 197
           ++   L  P +VKP  EGSS G+  V            +S   + +QV+VE++I G E T
Sbjct: 124 TSEHPLQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVERYIHGRELT 183

Query: 198 IATLRGQVL---PPIALGTPHTFYDYDAKYLASDTQYRIPCGLDASKEQELMDLTAKACE 254
              L G+ L     + LG  H FYDYDAKY A  +++ IP G+     Q++  L   A +
Sbjct: 184 CGVLDGEALGVTEVVPLG--HNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTLAVMAHQ 241

Query: 255 ALGIAGWARADVMQDDQ----GDFWFLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310
           A+G  G +R+D   DD+    G+  +LEVNT PGMT  SLVP  A  AG  F  LV  ++
Sbjct: 242 AIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLVSWMV 301

Query: 311 ADS 313
            D+
Sbjct: 302 EDA 304