Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas simiae WCS417

 Score =  155 bits (393), Expect = 2e-42
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 20/370 (5%)

Query: 19  IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKE-SPVTERLKTFGAQIFIGHRAENAAEA- 76
           IH +GI G  M  +A +   LG+ V+GSD     P++ +L+  G ++  G+         
Sbjct: 3   IHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLEAQGIELTQGYDPSQFDPVP 62

Query: 77  DVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLIA 135
           D++V+ +A++  NP V   L + +P V   + LA+ +++ R  +AVAGTHGKTTT+S++A
Sbjct: 63  DLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSMLA 122

Query: 136 SVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESDAS-------FLHLQPLVAV 188
            V    G+ P F+IGG       +A+LG + + + EADE D++       F+H +P  A+
Sbjct: 123 WVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSKFVHYRPRTAI 182

Query: 189 VTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPL-VKRPTVTY 247
           + N++ DH   +  D   +++ F   +  +P  GL +    +P ++ ++ +    P  T 
Sbjct: 183 LNNLEFDHADIFP-DLAAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQTT 241

Query: 248 GFSEDADVRAINVRQEGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDEGVS 307
           G      V+ ++   +G  + F VL   +    V  +M G HNV N+L T+  A   GV 
Sbjct: 242 GAGGQWQVKLLS--DDG--STFEVLFEGQTQGIVEWDMTGQHNVANALVTLAAARHVGVV 297

Query: 308 DEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVMLVDDYGHHPTEVAAVIKAVRGGWPERRL 367
               +  LS F  V RR +       D   V + DD+ HHPT +A  +  +R    +  +
Sbjct: 298 PSMGIAALSAFKSVKRRMEKV----ADVNGVTIYDDFAHHPTAIATTLDGLRKRVGDAPI 353

Query: 368 VMVYQPHRYS 377
           + + +P   S
Sbjct: 354 IAIVEPRSNS 363