Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas simiae WCS417

Subject, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

 Score =  164 bits (414), Expect = 8e-45
 Identities = 139/483 (28%), Positives = 218/483 (45%), Gaps = 44/483 (9%)

Query: 19  IHFVGIGGVGMCGIAEVLLNLGYQVSGSDLKE-SPVTERLKTFGAQIFIGHRAENAA-EA 76
           IH +GI G  M G+A +    G++V+G D     P++++L++ G  +  G  AE      
Sbjct: 3   IHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKLSP 62

Query: 77  DVLVVSSAVNTSN--------PEVATALERRIPVVPRAEMLAE-LMRYRHGIAVAGTHGK 127
           D+ V+ + V+ +         P +   L+   P     + LAE +++ RH +AVAGTHGK
Sbjct: 63  DMFVIGNVVSRARLPDGSPKFPLMEAILDAGKPYTSGPQWLAEHVLQGRHVLAVAGTHGK 122

Query: 128 TTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESD-------ASFL 180
           TTTTS++A V   GG  P F++GG     G +A+LG     + EADE D       + F+
Sbjct: 123 TTTTSMLAWVLEKGGKAPGFLVGGVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSKFV 182

Query: 181 HLQPLVAVVTNIDEDHMATYDGDFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLV 240
           H +P  AV+ N++ DH   +D D   +++ F   +  +P  G  VV   +  +R +L   
Sbjct: 183 HYRPRTAVLNNLEFDHADIFD-DLAAIERQFHHLVRTVPSTGRLVVNATEESLRHVL--- 238

Query: 241 KRPTVTYG-FSEDADVRAINVRQ-EGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATI 298
                + G +SE A   A    Q  G    F VLR       V   + G HN +N+LA I
Sbjct: 239 -----SQGCWSELARFGAGGEWQARGSHDAFDVLRQGEVIGRVEWELSGLHNQMNALAAI 293

Query: 299 CIATDEGVSDEAIVEGLSRFAGVGRRFQVYGQLPVDGGDVMLVDDYGHHPTEVAAVIKAV 358
             A   GV        L  F  V RR ++ G +   GG + + DD+ HHPT +   +  +
Sbjct: 294 AAADHVGVPPAEAARALGSFRNVRRRMELRGTVERSGGSITVYDDFAHHPTAIRTTLDGL 353

Query: 359 R-----GGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLMEVYPAGEEPIPGAD 413
           R      G    R++  ++P   S T  L      +        L   + AG +    A 
Sbjct: 354 RNKLDAAGKKSERILAAFEPR--SNTMKLGVMAAQLPWSLEAADLSFCHTAGLDWDVAAA 411

Query: 414 SRKLCNSIRQRGQLDPIYIERGVDLAPIVKPLLRAGDILLCQGAGDIGGLAPKLLASPLF 473
              +    +  G ++P+  +        +    R GD ++C   G  GG+  KLLA+   
Sbjct: 412 LAPMGERAQLAGAIEPLVNQ--------IVAAARPGDHIVCMSNGGFGGVHDKLLAALKA 463

Query: 474 AAA 476
           AAA
Sbjct: 464 AAA 466